|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | protein dephosphorylation, | 0.002134783 | GO:0006470 | | microtubule organizing center, | 0.006011678 | GO:0005815 | | spindle pole, | 0.006011678 | GO:0000922 | | dephosphorylation, | 0.027808714 | GO:0016311 | | microtubule cytoskeleton organization, | 0.027808714 | GO:0000226 | | C2H2 Transcription_Regulator(from PlantTFDB) | 0.033159637 | GFam | | isoprenoid biosynthetic process, | 0.033640831 | GO:0008299 | | selenium binding, | 0.043587214 | GO:0008430 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000015G2370 | RHOMBOID-like 1 | AT2G29050 (2.50E-70) | | PH01000118G0760 | Spc97 / Spc98 family of spindle pole body (SBP) component | AT5G17410 (0.00E+00) | | PH01000276G1310 | Protein phosphatase 2C family protein | AT3G51370 (3.00E-150) | | PH01000790G0590 | dual specificity protein phosphatase family protein | AT5G23720 (1.00E-180) | | PH01000918G0240 | zinc finger (C2H2 type) family protein | AT4G06634 (2.20E-96) | | PH01000993G0280 | Selenoprotein, Rdx type | AT5G58640 (1.00E-60) | | PH01001766G0240 | geranyl diphosphate synthase 1 | AT2G34630 (4.70E-96) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000906 | HSF Transcription_Regulator(from PlantTFDB)
protein ADP-ribosylation,
dephosphorylation,
protein methylation,
Base_excision_repair
| details | | CFinderM001329 | Endocytosis
selenium binding,
dephosphorylation,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
protein dephosphorylation,
cell redox homeostasis,
| details | | CFinderM001330 | selenium binding,
dephosphorylation,
protein tyrosine/serine/threonine phosphatase activity,
protein tyrosine phosphatase activity,
Endocytosis
mRNA_surveillance_pathway
phosphatase activity,
protein dephosphorylation,
cell redox homeostasis,
| details | | CFinderM001666 | integral to membrane,
C2H2 Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001698 | Steroid_biosynthesis
endodeoxyribonuclease activity, producing 5'-phosphomonoesters,
sterol_24-C-methyltransferase_activity
single-stranded DNA binding,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
WRKY Transcription_Regulator(from PlantTFDB)
dephosphorylation,
steroid biosynthetic process,
| details | | CFinderM001752 | spindle pole,
microtubule organizing center,
STE_STE11 (from iTAK)
microtubule cytoskeleton organization,
mRNA_surveillance_pathway
| details | | CFinderM001818 | C2H2 Transcription_Regulator(from PlantTFDB)
fatty-acyl-CoA binding,
| details | | CFinderM001825 | GT66 GlycosylTransferases
cation:chloride_symporter_activity
oligosaccharyl transferase activity,
spindle pole,
microtubule organizing center,
microtubule cytoskeleton organization,
ion transport,
| details | | CFinderM001845 | protein complex,
microtubule,
PLATZ Transcription_Regulator(from iTAK)
Phagosome
mRNA_surveillance_pathway
CAMK_CAMKL-CHK1 (from iTAK)
protein polymerization,
microtubule-based process,
dephosphorylation,
| details | | CFinderM001878 | isoprenoid biosynthetic process,
mRNA_surveillance_pathway
C2H2 Transcription_Regulator(from PlantTFDB)
fatty-acyl-CoA binding,
| details | | CFinderM001880 | RNA_transport
C2H2 Transcription_Regulator(from PlantTFDB)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
| details | | CFinderM001886 | Steroid_biosynthesis
ubiquitin ligase complex,
sterol_24-C-methyltransferase_activity
dephosphorylation,
steroid biosynthetic process,
mRNA_surveillance_pathway
protein ubiquitination,
protein dephosphorylation,
| details | | CFinderM001897 | phosphatase activity,
mRNA_surveillance_pathway
dephosphorylation,
protein dephosphorylation,
protein ubiquitination,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
ubiquitin ligase complex,
| details |
4.Expression profilings |
