CFinderM001345's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
C3H Transcription_Regulator(from PlantTFDB)0.013428254GFam
1,3-beta-D-glucan synthase complex,0.014039223GO:0000148
catalase activity,0.020382016GO:0004096
membrane,0.03241904GO:0016020
(1->3)-beta-D-glucan biosynthetic process,0.03899784GO:0006075
Tryptophan_metabolism0.03899784KEGG
Glyoxylate_and_dicarboxylate_metabolism0.039875455KEGG
Peroxisome0.039875455KEGG
RNA-dependent DNA replication,0.040472285GO:0006278
Methane_metabolism0.041076959KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000010G0320early-responsive to dehydration stress protein (ERD4)AT4G35870 (0.00E+00)
PH01000057G1220Zinc finger C-x8-C-x5-C-x3-H type family proteinAT1G19860 (5.00E-71)
PH01000085G1360Protein of unknown function (DUF1644)AT3G24740 (3.00E-35)
PH01000724G0090catalase 2AT4G35090 (0.00E+00)
PH01002010G0130glucan synthase-like 12AT5G13000 (0)
PH01004503G0140LisH/CRA/RING-U-box domains-containing proteinAT4G37880 (2.00E-116)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000438GTnc GlycosylTransferases
Base_excision_repair
methylation,
metabolic process,
amino_acid_transmembrane_transport
base-excision repair,
fatty-acyl-CoA binding,
DNA-3-methyladenine glycosylase activity,
amino acid transmembrane transporter activity,
catalytic activity,
details
CFinderM000569CMGC_Pl-Tthe (from iTAK)
1,3-beta-D-glucan synthase activity,
1,3-beta-D-glucan synthase complex,
membrane,
Regulation_of_autophagy
details
CFinderM000584membrane,
TKL-Pl-6 (from iTAK)
TKL-Pl-4 (from iTAK)
1,3-beta-D-glucan synthase complex,
(1->3)-beta-D-glucan biosynthetic process,
RNA-dependent DNA replication,
details
CFinderM000826dihydrodipicolinate synthase activity,
Lysine_biosynthesis
lysine biosynthetic process via diaminopimelate,
spliceosomal complex,
nuclear mRNA splicing, via spliceosome,
lyase activity,
GT48 GlycosylTransferases
C3H Transcription_Regulator(from PlantTFDB)
rRNA binding,
details
CFinderM0011231,3-beta-D-glucan synthase activity,
(1->3)-beta-D-glucan biosynthetic process,
1,3-beta-D-glucan synthase complex,
RNA-dependent DNA replication,
membrane,
RNA-directed DNA polymerase activity,
details

4.Expression profilings