|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Spliceosome | 0.001577737 | KEGG | | GT32 GlycosylTransferases | 0.003437339 | GFam | | Golgi stack, | 0.003748769 | GO:0005795 | | AGC_NDR (from iTAK) | 0.006868879 | GFam | | GTnc GlycosylTransferases | 0.017119167 | GFam | | thiol oxidase activity, | 0.03416647 | GO:0016972 | | nucleotide binding, | 0.03416647 | GO:0000166 | | snRNA_binding | 0.037901119 | GO:0017069 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000408G0640 | Erv1/Alr family protein | AT1G49880 (4.90E-36) | | PH01000523G0850 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein | AT4G14350 (0.00E+00) | | PH01000618G0650 | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | AT1G17500 (0.00E+00) | | PH01000659G0110 | - | AT3G51580 (9.20E-19) | | PH01000744G0850 | spliceosomal protein U1A | AT2G47580 (3.00E-48) | | PH01001015G0430 | RNA-binding (RRM/RBD/RNP motifs) family protein | AT1G02840 (3.20E-60) | | PH01001390G0320 | TLD-domain containing nucleolar protein | AT5G06260 (1.00E-144) | | PH01002322G0270 | alpha 1,4-glycosyltransferase family protein | AT4G19900 (5.00E-101) | | PH01002854G0250 | elongation defective 1 protein / ELD1 protein | AT3G08550 (0.00E+00) | | PH01003569G0110 | Protein of unknown function (DUF300) | AT5G26740 (3.20E-60) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000454 | DNA replication, synthesis of RNA primer,
DNA primase activity,
| details | | CFinderM000873 | GH47 Glycoside_Hydrolases
AGC_NDR (from iTAK)
thiol oxidase activity,
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity,
| details | | CFinderM000886 | Spliceosome
RNA_degradation
| details | | CFinderM001109 | RLK-Pelle_LRR-VI-2 (from iTAK)
regulation of Rab GTPase activity,
Spliceosome
| details | | CFinderM001259 | phospholipid transport,
Spliceosome
| details | | CFinderM001328 | GT32 GlycosylTransferases
Golgi stack,
CMGC_SRPK (from iTAK)
| details | | CFinderM001373 | GTnc GlycosylTransferases
phospholipid transport,
cellular metabolic process,
cation transport,
| details | | CFinderM001610 | Sphingolipid_metabolism
alpha-Linolenic_acid_metabolism
carboxylic acid metabolic process,
catalytic activity,
carboxy-lyase activity,
| details | | CFinderM001805 | Golgi vesicle transport,
vesicle-mediated transport,
Spliceosome
| details | | CFinderM001814 | Spliceosome
nucleotide binding,
snRNA_binding
nuclear mRNA splicing, via spliceosome,
phospholipid transport,
phospholipid-translocating ATPase activity,
cation transport,
| details |
4.Expression profilings |
