CFinderM001814's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Spliceosome0.000534478KEGG
nucleotide binding,0.00585231GO:0000166
snRNA_binding0.016301791GO:0017069
nuclear mRNA splicing, via spliceosome,0.016976844GO:0000398
phospholipid transport,0.016976844GO:0015914
phospholipid-translocating ATPase activity,0.025788992GO:0004012
cation transport,0.044585992GO:0006812

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000744G0850spliceosomal protein U1AAT2G47580 (3.00E-48)
PH01001015G0430RNA-binding (RRM/RBD/RNP motifs) family proteinAT1G02840 (3.20E-60)
PH01001156G0010ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family proteinAT1G17500 (0.00E+00)
PH01003178G0130-- (-)
PH01004186G0100-- (-)
PH01173539G0010cyclic nucleotide gated channel 1AT5G53130 (2.70E-80)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000454DNA replication, synthesis of RNA primer,
DNA primase activity,
details
CFinderM000746CMGC_DYRK-YAK (from iTAK)
TKL-Pl-6 (from iTAK)
details
CFinderM000886Spliceosome
RNA_degradation
details
CFinderM001109RLK-Pelle_LRR-VI-2 (from iTAK)
regulation of Rab GTPase activity,
Spliceosome
details
CFinderM001358spliceosomal complex,
nuclear mRNA splicing, via spliceosome,
details
CFinderM001361transcription factor TFIIF complex,
protein_oligomerization
cell communication,
transcription initiation from RNA polymerase II promoter,
Basal_transcription_factors
phosphatidylinositol binding,
chaperone binding,
bHLH Transcription_Regulator(from PlantTFDB)
details
CFinderM001372Spliceosome
GT32 GlycosylTransferases
Golgi stack,
AGC_NDR (from iTAK)
GTnc GlycosylTransferases
thiol oxidase activity,
nucleotide binding,
snRNA_binding
details
CFinderM001478GH47 Glycoside_Hydrolases
purine ribonucleoside monophosphate biosynthetic process,
IMP biosynthetic process,
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity,
deaminase activity,
AMP deaminase activity,
potassium_ion_transmembrane_transport
membrane,
potassium ion transmembrane transporter activity,
details
CFinderM001621AGC_NDR (from iTAK)
purine ribonucleoside monophosphate biosynthetic process,
IMP biosynthetic process,
ubiquitin ligase complex,
G-protein coupled receptor signaling pathway,
AMP deaminase activity,
guanyl nucleotide binding,
G-protein_beta/gamma-subunit_complex_binding
deaminase activity,
Spliceosome
details
CFinderM001805Golgi vesicle transport,
vesicle-mediated transport,
Spliceosome
details

4.Expression profilings