CFinderM001549's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
SNARE_interactions_in_vesicular_transport1.36E-05KEGG
vesicle-mediated transport,0.000580954GO:0016192
intracellular protein transport,0.001298195GO:0006886
SNAP receptor activity,0.011337369GO:0005484
structural molecule activity,0.031312863GO:0005198

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000215G0810-AT4G35320 (2.00E-18)
PH01000436G0090Glycoprotein membrane precursor GPI-anchoredAT5G19250 (5.50E-46)
PH01000592G0400syntaxin of plants 32AT3G24350 (1.20E-91)
PH01000783G0230Vesicle transport v-SNARE family proteinAT5G39510 (2.70E-80)
PH01002218G0080plant VAP homolog 12AT2G45140 (3.30E-73)
PH01005471G0060Endomembrane protein 70 protein familyAT2G01970 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000591HB-other Transcription_Regulator(from PlantTFDB)
SNARE_interactions_in_vesicular_transport
WASH_complex
actin cytoskeleton,
spliceosomal complex,
pre-mRNA_intronic_binding
details
CFinderM000804cysteine synthase activity,
chorismate mutase activity,
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
SET Transcription_Regulator(from iTAK)
cysteine biosynthetic process from serine,
aromatic amino acid family biosynthetic process,
chorismate metabolic process,
SNARE_interactions_in_vesicular_transport
Sulfur_metabolism
Cysteine_and_methionine_metabolism
details
CFinderM001408outer membrane,
peptide-methionine-(S)-S-oxide reductase activity,
details
CFinderM001444nucleolus,
SNARE_interactions_in_vesicular_transport
Homologous_recombination
SOS_response
DNA metabolic process,
ribosome biogenesis,
single-stranded DNA binding,
DNA-dependent ATPase activity,
details
CFinderM001501details
CFinderM001627SET Transcription_Regulator(from iTAK)
intracellular protein transport,
SNARE_interactions_in_vesicular_transport
mRNA_surveillance_pathway
details
CFinderM001629mRNA_surveillance_pathway
peptide-methionine-(S)-S-oxide reductase activity,
details
CFinderM001795SOS_response
Homologous_recombination
SNARE_interactions_in_vesicular_transport
DNA metabolic process,
details

4.Expression profilings