CFinderM001560's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
HB-KNOX Transcription_Regulator(from iTAK)0.027193113GFam
GT48 GlycosylTransferases0.027193113GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000125G1100glucan synthase-like 12AT5G13000 (0)
PH01000135G0910Protein of unknown function (DUF616)AT2G02910 (5.00E-100)
PH01000286G0100cyclic nucleotide-gated channel 17AT4G30360 (1.90E-86)
PH01000448G0060Protein kinase superfamily proteinAT2G42960 (1.00E-169)
PH01000666G0870Protein kinase superfamily proteinAT2G05940 (6.00E-135)
PH01000735G0590KNOTTED1-like homeobox gene 3AT5G25220 (4.00E-109)
PH01000791G0370TPX2 (targeting protein for Xklp2) protein familyAT4G32330 (6.10E-57)
PH01001926G0380alpha/beta-Hydrolases superfamily proteinAT4G37470 (2.80E-63)
PH01002429G0240Leucine-rich repeat (LRR) family proteinAT5G21090 (2.00E-74)
PH01002546G0060gamma-tubulin complex protein 2AT5G05620 (0.00E+00)
PH01002891G0030myb-like HTH transcriptional regulator family proteinAT2G01060 (4.90E-65)
PH01062417G0010-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000521protein complex,
microtubule,
cytokinesis
microtubule cytoskeleton organization,
protein polymerization,
microtubule-based process,
AGC_RSK-2 (from iTAK)
details
CFinderM000561GT4 GlycosylTransferases
NADP_biosynthetic_process
phosphorylation,
NAD+ kinase activity,
peptidyl-prolyl cis-trans isomerase activity,
details
CFinderM000562GT4 GlycosylTransferases
biosynthetic process,
details
CFinderM000642details
CFinderM000649B3 Transcription_Regulator(from PlantTFDB)
details
CFinderM000747microtubule,
protein complex,
microtubule-based process,
protein polymerization,
details
CFinderM000768peptidyl-prolyl cis-trans isomerase activity,
details
CFinderM000773GT4 GlycosylTransferases
phosphorylation,
magnesium_ion_transport
peptidyl-prolyl cis-trans isomerase activity,
magnesium_ion_transmembrane_transporter_activity
details
CFinderM000907SNARE_interactions_in_vesicular_transport
details
CFinderM000918GT48 GlycosylTransferases
RLK-Pelle_RLCK-V (from iTAK)
TKL-Pl-4 (from iTAK)
microtubule cytoskeleton organization,
(1->3)-beta-D-glucan biosynthetic process,
cytokinesis
1,3-beta-D-glucan synthase complex,
mRNA_surveillance_pathway
details
CFinderM001000microtubule cytoskeleton organization,
cytokinesis
GTnc GlycosylTransferases
RLK-Pelle_RLCK-V (from iTAK)
RLK-Pelle_LRR-V (from iTAK)
details
CFinderM001045membrane,
1,3-beta-D-glucan synthase complex,
Glutathione_metabolism
MYB_related Transcription_Regulator(from PlantTFDB)
Ascorbate_and_aldarate_metabolism
MYB-related Transcription_Regulator(from iTAK)
details
CFinderM001288HB-KNOX Transcription_Regulator(from iTAK)
TALE Transcription_Regulator(from PlantTFDB)
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
Amino_sugar_and_nucleotide_sugar_metabolism
Glutathione_metabolism
SNARE_interactions_in_vesicular_transport
Ascorbate_and_aldarate_metabolism
details
CFinderM0013031,3-beta-D-glucan synthase complex,
Methane_metabolism
(1->3)-beta-D-glucan biosynthetic process,
drug transmembrane transport,
membrane,
antiporter activity,
drug transmembrane transporter activity,
1,3-beta-D-glucan synthase activity,
details
CFinderM001561GT48 GlycosylTransferases
HB-KNOX Transcription_Regulator(from iTAK)
TKL-Pl-6 (from iTAK)
TALE Transcription_Regulator(from PlantTFDB)
1,3-beta-D-glucan synthase complex,
details
CFinderM001562HB-KNOX Transcription_Regulator(from iTAK)
sterol_24-C-methyltransferase_activity
TALE Transcription_Regulator(from PlantTFDB)
SNARE_interactions_in_vesicular_transport
Steroid_biosynthesis
MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
Ascorbate_and_aldarate_metabolism
details
CFinderM001687details
CFinderM001696phenylalanyl-tRNA aminoacylation,
microtubule,
mitochondrial outer membrane,
protein complex,
Fatty_acid_metabolism
Peroxisome
Aminoacyl-tRNA_biosynthesis
phenylalanine-tRNA ligase activity,
tRNA aminoacylation,
protein polymerization,
microtubule-based process,
tRNA binding,
details
CFinderM001811cytokinesis
microtubule cytoskeleton organization,
microtubule binding,
details
CFinderM001858RLK-Pelle_RLCK-V (from iTAK)
katanin_complex
Endocytosis
microtubule_severing
details

4.Expression profilings


Show details about module gene expression profiling