|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | nuclear pore, | 0.023552017 | GO:0005643 | | ribonucleoside_binding | 0.029943468 | GO:0032549 | | NAC Transcription_Regulator(from PlantTFDB) | 0.040869929 | GFam | | 1,3-beta-D-glucan synthase activity, | 0.043089795 | GO:0003843 | | DNA-directed RNA polymerase activity, | 0.043089795 | GO:0003899 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000021G0720 | NAC domain containing protein 53 | AT3G10500 (3.40E-65) | | PH01000077G1670 | alpha/beta-Hydrolases superfamily protein | AT5G36210 (4.40E-54) | | PH01000203G0670 | Serinc-domain containing serine and sphingolipid biosynthesis protein | AT1G16180 (2.00E-119) | | PH01000779G0280 | Protein prenylyltransferase superfamily protein | AT5G17270 (1.00E-24) | | PH01001349G0310 | callose synthase 1 | AT1G05570 (1.80E-28) | | PH01003454G0090 | nuclear RNA polymerase C2 | AT5G45140 (4.00E-163) | | PH01003734G0070 | Protein of unknown function (DUF3414) | AT5G51200 (2.00E-178) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000615 | cellular protein metabolic process,
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
protein methylation,
protein refolding,
RNA_degradation
| details | | CFinderM001483 | eukaryotic translation initiation factor 3 complex,
cytoplasm,
valyl-tRNA aminoacylation,
aminoacyl-tRNA_editing_activity
valine-tRNA ligase activity,
guanyl nucleotide binding,
G-protein_beta/gamma-subunit_complex_binding
G-protein coupled receptor signaling pathway,
Aminoacyl-tRNA_biosynthesis
| details | | CFinderM001585 | bZIP Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001733 | nucleotide-sugar transport,
carbohydrate transport,
nucleotide-sugar transmembrane transporter activity,
Golgi membrane,
sugar:hydrogen symporter activity,
metallopeptidase activity,
NAC Transcription_Regulator(from PlantTFDB)
metalloendopeptidase activity,
| details | | CFinderM001734 | NAC Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001746 | cellular amino acid metabolic process,
Glycine,_serine_and_threonine_metabolism
aminoacylase activity,
Lysine_biosynthesis
Arginine_and_proline_metabolism
Cysteine_and_methionine_metabolism
metallopeptidase activity,
| details | | CFinderM001755 | STE_STE7 (from iTAK)
nucleotide-sugar transport,
S-adenosylmethionine_biosynthetic_process
carbohydrate transport,
| details | | CFinderM001791 | valyl-tRNA aminoacylation,
eukaryotic translation initiation factor 3 complex,
cytoplasm,
aminoacyl-tRNA_editing_activity
valine-tRNA ligase activity,
Aminoacyl-tRNA_biosynthesis
NAC Transcription_Regulator(from PlantTFDB)
tRNA aminoacylation for protein translation,
| details | | CFinderM001871 | Steroid_biosynthesis
steroid biosynthetic process,
sterol_24-C-methyltransferase_activity
| details |
4.Expression profilings |
