CFinderM001759's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Citrate_cycle_(TCA_cycle)0.000513014KEGG
tricarboxylic acid cycle enzyme complex,0.001687605GO:0045239
phenylalanyl-tRNA aminoacylation,0.004281183GO:0006432
fumarate metabolic process,0.004281183GO:0006106
tricarboxylic acid cycle,0.013889945GO:0006099
tRNA aminoacylation,0.013889945GO:0043039
phenylalanine-tRNA ligase activity,0.013964229GO:0004826
fumarate hydratase activity,0.013964229GO:0004333
tRNA binding,0.027911004GO:0000049
Carbon_fixation_pathways_in_prokaryotes0.029912131KEGG
Aminoacyl-tRNA_biosynthesis0.041917772KEGG
Pyruvate_metabolism0.043086982KEGG
Glycolysis_/_Gluconeogenesis0.047967157KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000307G0680negative regulator of systemic acquired resistance (SNI1)AT4G18470 (3.10E-42)
PH01000416G0630fumarase 1AT2G47510 (4.00E-141)
PH01000476G0050protein phosphatase 2A subunit A2AT3G25800 (0.00E+00)
PH01000748G0550-- (-)
PH01002063G0150tRNA synthetase beta subunit family proteinAT1G72550 (6.00E-131)
PH01002702G0180Dihydrolipoamide acetyltransferase, long form proteinAT3G52200 (5.40E-92)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000835phenylalanyl-tRNA aminoacylation,
aminoacyl-tRNA ligase activity,
phenylalanine-tRNA ligase activity,
tRNA binding,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
nucleotide binding,
magnesium ion binding,
cytoplasm,
GeBP Transcription_Regulator(from PlantTFDB)
RNA binding,
tRNA aminoacylation for protein translation,
ATP binding,
details
CFinderM001054seryl-tRNA aminoacylation,
electron transport chain,
bZIP Transcription_Regulator(from PlantTFDB)
serine-tRNA ligase activity,
RNA metabolic process,
details
CFinderM001647phenylalanyl-tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
tRNA binding,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
aminoacyl-tRNA ligase activity,
fumarate metabolic process,
nucleotide binding,
magnesium ion binding,
tricarboxylic acid cycle enzyme complex,
fumarate hydratase activity,
cytoplasm,
mitochondrial outer membrane,
RNA binding,
tricarboxylic acid cycle,
Carbon_fixation_pathways_in_prokaryotes
Citrate_cycle_(TCA_cycle)
lyase activity,
details
CFinderM001760Citrate_cycle_(TCA_cycle)
oxoglutarate dehydrogenase complex,
transferase activity, transferring acyl groups,
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity,
dihydrolipoyllysine-residue succinyltransferase activity,
tricarboxylic acid cycle,
electron transport chain,
cellular protein modification process,
Lysine_degradation
details
CFinderM001847peptide-methionine_(R)-S-oxide_reductase_activity
binding,
metallopeptidase activity,
details
CFinderM001892phenylalanyl-tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
WRKY Transcription_Regulator(from PlantTFDB)
tRNA binding,
details

4.Expression profilings