|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | phenylalanyl-tRNA aminoacylation, | 0.004124935 | GO:0006432 | | Aminoacyl-tRNA_biosynthesis | 0.011014889 | KEGG | | tRNA aminoacylation, | 0.012869287 | GO:0043039 | | phenylalanine-tRNA ligase activity, | 0.021966918 | GO:0004826 | | WRKY Transcription_Regulator(from PlantTFDB) | 0.032616523 | GFam | | tRNA binding, | 0.032929784 | GO:0000049 |
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000188 | ubiquitin-dependent protein catabolic process,
| details | | CFinderM000365 | microtubule-based movement,
microtubule associated complex,
microtubule motor activity,
regulation of Rab GTPase activity,
Rab GTPase activator activity,
| details | | CFinderM000835 | phenylalanyl-tRNA aminoacylation,
aminoacyl-tRNA ligase activity,
phenylalanine-tRNA ligase activity,
tRNA binding,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
nucleotide binding,
magnesium ion binding,
cytoplasm,
GeBP Transcription_Regulator(from PlantTFDB)
RNA binding,
tRNA aminoacylation for protein translation,
ATP binding,
| details | | CFinderM001092 | CBM20 Carbohydrate-Binding_Modules
GH77 Glycoside_Hydrolases
membrane coat,
4-alpha-glucanotransferase activity,
starch_binding
| details | | CFinderM001155 | UDP-glucose:glycoprotein_glucosyltransferase_activity
nuclear pore,
binding,
protein transporter activity,
Proteasome
protein glycosylation,
| details | | CFinderM001318 | RLK-Pelle_RLCK-XI (from iTAK)
GT4 GlycosylTransferases
Glycosylphosphatidylinositol(GPI)-anchor_biosynthesis
Rab GDP-dissociation inhibitor activity,
GPI anchor biosynthetic process,
| details | | CFinderM001342 | | details | | CFinderM001377 | C2H2 Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001647 | phenylalanyl-tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
tRNA binding,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
aminoacyl-tRNA ligase activity,
fumarate metabolic process,
nucleotide binding,
magnesium ion binding,
tricarboxylic acid cycle enzyme complex,
fumarate hydratase activity,
cytoplasm,
mitochondrial outer membrane,
RNA binding,
tricarboxylic acid cycle,
Carbon_fixation_pathways_in_prokaryotes
Citrate_cycle_(TCA_cycle)
lyase activity,
| details | | CFinderM001673 | HAUS_complex
RLK-Pelle_LRR-V (from iTAK)
STE_STE11 (from iTAK)
spindle_assembly
zinc_ion_transmembrane_transport
| details | | CFinderM001743 | | details | | CFinderM001759 | Citrate_cycle_(TCA_cycle)
tricarboxylic acid cycle enzyme complex,
phenylalanyl-tRNA aminoacylation,
fumarate metabolic process,
tricarboxylic acid cycle,
tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
fumarate hydratase activity,
tRNA binding,
Carbon_fixation_pathways_in_prokaryotes
Aminoacyl-tRNA_biosynthesis
Pyruvate_metabolism
Glycolysis_/_Gluconeogenesis
| details | | CFinderM001787 | protein-L-isoaspartate (D-aspartate) O-methyltransferase activity,
cellular protein modification process,
binding,
| details | | CFinderM001824 | rRNA modification,
rRNA methyltransferase activity,
rRNA (adenine-N6,N6-)-dimethyltransferase activity,
tRNA aminoacylation,
ligase activity, forming aminoacyl-tRNA and related compounds,
tRNA aminoacylation for protein translation,
| details | | CFinderM001829 | retrograde transport, endosome to Golgi,
proton transport,
hydrogen-translocating pyrophosphatase activity,
inorganic diphosphatase activity,
Ether_lipid_metabolism
WRKY Transcription_Regulator(from PlantTFDB)
Glycerophospholipid_metabolism
Oxidative_phosphorylation
| details | | CFinderM001846 | rRNA modification,
rRNA methyltransferase activity,
rRNA (adenine-N6,N6-)-dimethyltransferase activity,
tRNA aminoacylation,
ligase activity, forming aminoacyl-tRNA and related compounds,
tRNA aminoacylation for protein translation,
| details | | CFinderM001847 | peptide-methionine_(R)-S-oxide_reductase_activity
binding,
metallopeptidase activity,
| details | | CFinderM001887 | microtubule organizing center,
spindle pole,
nuclear pore,
microtubule cytoskeleton organization,
C2H2 Transcription_Regulator(from PlantTFDB)
RNA_transport
| details | | CFinderM001893 | Golgi-associated vesicle,
Terpenoid_backbone_biosynthesis
membrane coat,
COPI vesicle coat,
isoprenoid biosynthetic process,
| details |
4.Expression profilings |
