CFinderM001821's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
protein processing,0.00174918GO:0016485
mRNA_surveillance_pathway0.0255358KEGG
protein binding,0.045112449GO:0005515

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000081G0220-AT4G14746 (1.40E-29)
PH01000092G0550Zn-dependent exopeptidases superfamily proteinAT3G52640 (6.90E-73)
PH01000276G1300RING/U-box superfamily proteinAT4G35840 (4.60E-58)
PH01000318G0140Uncharacterised protein family (UPF0497)AT1G17200 (7.60E-54)
PH01000686G0090-- (-)
PH01001209G0060Ataxia telangiectasia-mutated and RAD3-relatedAT5G40820 (5.20E-46)
PH01001962G0210tetratricopeptide repeat (TPR)-containing proteinAT1G80410 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000188ubiquitin-dependent protein catabolic process,
details
CFinderM000563Fatty_acid_elongation
Biosynthesis_of_unsaturated_fatty_acids
oxidoreductase activity, acting on the CH-CH group of donors,
NAK (from iTAK)
integral to membrane,
cytoplasm,
Steroid_hormone_biosynthesis
lipid metabolic process,
protein processing,
peroxiredoxin activity,
antioxidant activity,
details
CFinderM000611WNK_NRBP (from iTAK)
PHD Transcription_Regulator(from iTAK)
details
CFinderM000862DBP Transcription_Regulator(from iTAK)
Golgi stack,
GPI-anchor transamidase complex,
details
CFinderM000938proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
binding,
mRNA_surveillance_pathway
hydrogen ion transmembrane transporter activity,
ATP hydrolysis coupled proton transport,
TORC1_complex
Phagosome
Oxidative_phosphorylation
phosphotransferase activity, alcohol group as acceptor,
TOR_signaling
rRNA_catabolic_process
details
CFinderM001055NF-YB Transcription_Regulator(from PlantTFDB)
details
CFinderM001087peroxiredoxin activity,
antioxidant activity,
Glutathione_metabolism
metallopeptidase activity,
details
CFinderM001230base-excision repair,
mRNA_surveillance_pathway
DNA repair,
details
CFinderM001231cullin-RING ubiquitin ligase complex,
RNA modification,
ubiquitin-dependent protein catabolic process,
details
CFinderM001310mRNA_surveillance_pathway
binding,
details
CFinderM001484RLK-Pelle_RLCK-VI (from iTAK)
mRNA_surveillance_pathway
details
CFinderM001590protein processing,
peroxiredoxin activity,
antioxidant activity,
integral to membrane,
Biosynthesis_of_unsaturated_fatty_acids
Fatty_acid_elongation
oxidoreductase activity, acting on the CH-CH group of donors,
double-stranded RNA binding,
ribonuclease III activity,
details
CFinderM001725cellular protein metabolic process,
MYB Transcription_Regulator(from PlantTFDB)
details
CFinderM001822protein processing,
PHD Transcription_Regulator(from iTAK)
details
CFinderM001853peroxisome organization,
integral_component_of_peroxisomal_membrane
cullin-RING ubiquitin ligase complex,
bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM001857protein processing,
antioxidant activity,
peroxiredoxin activity,
details
CFinderM001893Golgi-associated vesicle,
Terpenoid_backbone_biosynthesis
membrane coat,
COPI vesicle coat,
isoprenoid biosynthetic process,
details

4.Expression profilings