|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | ubiquitin-dependent protein catabolic process, | 0.000269999 | GO:0006511 | | ubiquitin thiolesterase activity, | 0.000303324 | GO:0004221 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000129G0040 | ubiquitin-specific protease 26 | AT3G49600 (0.00E+00) | | PH01000368G0120 | O-fucosyltransferase family protein | AT1G35510 (2.00E-148) | | PH01000544G0630 | ubiquitin-specific protease 17 | AT5G65450 (3.00E-121) | | PH01000968G0200 | - | AT4G24380 (1.80E-75) | | PH01001806G0280 | alpha/beta-Hydrolases superfamily protein | AT3G51000 (4.90E-35) | | PH01002033G0310 | NAD(P)-binding Rossmann-fold superfamily protein | AT5G52810 (1.00E-49) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000188 | ubiquitin-dependent protein catabolic process,
| details | | CFinderM000456 | DNA methylation,
Peroxisome
Fatty_acid_metabolism
| details | | CFinderM000845 | iron-sulfur cluster assembly,
| details | | CFinderM000914 | tetrapyrrole biosynthetic process,
glutamate-1-semialdehyde 2,1-aminomutase activity,
ubiquitin-dependent protein catabolic process,
| details | | CFinderM001342 | | details | | CFinderM001343 | Golgi-associated vesicle,
binding,
Terpenoid_backbone_biosynthesis
guanyl-nucleotide exchange factor activity,
COPI vesicle coat,
membrane coat,
| details | | CFinderM001527 | PHD Transcription_Regulator(from iTAK)
guanyl-nucleotide exchange factor activity,
| details | | CFinderM001542 | guanyl-nucleotide exchange factor activity,
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity,
small GTPase mediated signal transduction,
signal transduction,
terpenoid biosynthetic process,
cellular component organization,
Terpenoid_backbone_biosynthesis
actin cytoskeleton organization,
intracellular,
| details | | CFinderM001575 | protein methylation,
ubiquitin thiolesterase activity,
ubiquitin-dependent protein catabolic process,
methyltransferase activity,
| details | | CFinderM001666 | integral to membrane,
C2H2 Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001676 | Spliceosome
| details | | CFinderM001726 | methyltransferase activity,
fucosyltransferase_activity
DNA methylation,
protein methylation,
Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
membrane,
protein glycosylation,
| details | | CFinderM001815 | | details | | CFinderM001818 | C2H2 Transcription_Regulator(from PlantTFDB)
fatty-acyl-CoA binding,
| details | | CFinderM001839 | GPI anchor metabolic process,
DNA methylation,
DNA recombination,
Base_excision_repair
Ubiquitin_mediated_proteolysis
| details | | CFinderM001876 | Spliceosome
| details |
4.Expression profilings |
