|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Basal_transcription_factors | 0.008596606 | KEGG | | SNF2 Transcription_Regulator(from iTAK) | 0.009155108 | GFam | | transferase activity, transferring pentosyl groups, | 0.017014029 | GO:0016763 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000061G0950 | HAC13 protein (HAC13) | AT1G32750 (1.00E-159) | | PH01000109G1050 | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related | AT1G61140 (0.00E+00) | | PH01000634G0070 | - | AT1G65270 (3.40E-73) | | PH01000708G0760 | AAA-type ATPase family protein | AT2G45500 (8.00E-151) | | PH01001218G0060 | - | - (-) | | PH01004030G0100 | initiator tRNA phosphoribosyl transferase family protein | AT2G40570 (1.00E-162) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000729 | positive_regulation_of_transcription,_DNA-templated
GATA Transcription_Regulator(from PlantTFDB)
C2C2-GATA Transcription_Regulator(from iTAK)
TKL_CTR1-DRK-2 (from iTAK)
mRNA_surveillance_pathway
| details | | CFinderM000732 | SNF2 Transcription_Regulator(from iTAK)
transferase activity, transferring pentosyl groups,
mRNA_surveillance_pathway
| details | | CFinderM000882 | GH35 Glycoside_Hydrolases
transferase activity, transferring pentosyl groups,
| details | | CFinderM001304 | nucleoside-triphosphatase activity,
ATPase activity, coupled to transmembrane movement of substances,
GT47 GlycosylTransferases
RLK-Pelle_CR4L (from iTAK)
ABC_transporters
ATPase activity,
ATP binding,
nucleotide binding,
SNF2 Transcription_Regulator(from iTAK)
| details | | CFinderM001436 | STE_STE20-Fray (from iTAK)
CAMTA Transcription_Regulator(from PlantTFDB)
Ubiquitin_mediated_proteolysis
| details | | CFinderM001628 | GH19 Glycoside_Hydrolases
transferase activity, transferring pentosyl groups,
chitinase activity,
ER to Golgi vesicle-mediated transport,
chitin catabolic process,
cell wall macromolecule catabolic process,
| details | | CFinderM001785 | transferase activity, transferring pentosyl groups,
Nicotinate_and_nicotinamide_metabolism
Diterpenoid_biosynthesis
| details | | CFinderM001789 | proton-transporting V-type ATPase, V0 domain,
proton-transporting two-sector ATPase complex, proton-transporting domain,
C3H Transcription_Regulator(from PlantTFDB)
ATP hydrolysis coupled proton transport,
DNA repair,
nuclease activity,
endonuclease activity,
hydrogen ion transmembrane transporter activity,
| details |
4.Expression profilings |
