CFinderADM000553's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| MAPK signaling pathway - fly | 9.67E-06 | KEGG pathway |
| mitotic sister chromatid cohesion | 3.76E-05 | GO:0007064 |
| nuclear envelope | 0.000114948 | GO:0005635 |
| protein import into nucleus | 0.000315726 | GO:0006606 |
| Protein_kinases_phosphatases, PPC:2.1.4: GmPK6/AtMRK1 Family | 0.000426915 | kinase family |
| Transcription_related, Transcription regulator: SET | 0.000530175 | TF family |
| Ran GTPase binding | 0.000631452 | GO:0008536 |
| protein transporter activity | 0.001645327 | GO:0008565 |
| signal transduction | 0.002599615 | GO:0007165 |
| kinase activity | 0.013280574 | GO:0016301 |
| phosphorylation | 0.014115596 | GO:0016310 |
| Ubiquitin_Proteasome_system, E3: RING | 0.018201594 | ubs family |
| cytosol | 0.049552359 | GO:0005829 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003027 | AT1G77800 (4.00E-103) | PHD finger family protein |
| CRO_T005461 | AT2G31660 (0) | EMA1|enhanced miRNA activity 1; SAD2|SUPER SENSITIVE TO ABA AND DROUGHT2; URM9|UNARMED 9 |
| CRO_T013881 | AT2G36960 (1.00E-166) | TKI1|TSL-kinase interacting protein 1 |
| CRO_T014812 | AT5G51340 (0) | Tetratricopeptide repeat (TPR)-like superfamily protein |
| CRO_T023114 | AT1G16270 (5.00E-17) | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain |
| CRO_T029290 | AT5G42400 (6.00E-16) | ATXR7|ARABIDOPSIS TRITHORAX-RELATED7; SDG25|SET domain protein 25 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000236 | Mitophagy - animal MAPK signaling pathway - fly transcription factor TFIID complex cytosol THO complex part of transcription export complex GMP synthase activity GMP synthase (glutamine-hydrolyzing) activity Ubiquitin_Proteasome_system, E3 adaptor: DWD cell plate production of ta-siRNAs involved in RNA interference regulation of ethylene-activated signaling pathway GMP biosynthetic process cytokinin-activated signaling pathway mRNA export from nucleus L-tryptophan biosynthesis sphingolipid biosynthesis (plants) regulation of vesicle fusion activation of GTPase activity cytokinesis by cell plate formation DNA-templated transcription, initiation Protein_kinases_phosphatases, PPC:2.1.4: GmPK6/AtMRK1 Family nuclear envelope Insulin signaling pathway protein import into nucleus Rab GTPase binding exocyst jasmonic acid mediated signaling pathway Ran GTPase binding Basal transcription factors GTPase activator activity exocytosis translational initiation endomembrane system protein transporter activity small GTPase mediated signal transduction protein heterodimerization activity Endocytosis signal transduction translation initiation factor activity transferase activity, transferring glycosyl groups endosome intracellular protein transport Spliceosome | details |
| CFinderADM000478 | Toll and Imd signaling pathway protein K63-linked ubiquitination postreplication repair CCR4-NOT core complex negative regulation of translation nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay protein complex scaffold cytoplasmic mRNA processing body Basal transcription factors Ubiquitin_Proteasome_system, E2: UBC RNA degradation ubiquitin protein ligase binding helicase activity peptidase activity nucleus ligase activity ubiquitin protein ligase activity Protein processing in endoplasmic reticulum Ubiquitin_Proteasome_system, E3 adaptor: DWD Ubiquitin_Proteasome_system, E3: RING transferase activity | details |
| CFinderADM000627 | aminoacyl-tRNA editing activity regulation of translational fidelity Aminoacyl-tRNA biosynthesis MAPK signaling pathway - fly valine-tRNA ligase activity valyl-tRNA aminoacylation isoleucyl-tRNA aminoacylation isoleucine-tRNA ligase activity mRNA processing embryo sac development protein import into nucleus Ran GTPase binding nuclear envelope cytosol rRNA processing protein transporter activity Ribosome biogenesis in eukaryotes signal transduction small-subunit processome ATP binding Ubiquitin_Proteasome_system, E3 adaptor: DWD nucleolus RNA binding | details |
| CFinderADM000628 | Toll and Imd signaling pathway MAPK signaling pathway - fly isoleucyl-tRNA aminoacylation protein K63-linked ubiquitination postreplication repair regulation of translational fidelity isoleucine-tRNA ligase activity mRNA processing embryo sac development protein import into nucleus aminoacyl-tRNA editing activity nuclear envelope cytosol Ran GTPase binding rRNA processing Ubiquitin_Proteasome_system, E2: UBC Aminoacyl-tRNA biosynthesis ubiquitin protein ligase binding protein transporter activity signal transduction small-subunit processome ligase activity ubiquitin protein ligase activity nucleolus Ubiquitin_Proteasome_system, E3 adaptor: DWD RNA binding | details |
| CFinderADM000756 | Ubiquitin_Proteasome_system, E3 adaptor: DWD Toll and Imd signaling pathway protein K63-linked ubiquitination postreplication repair transferase activity Basal transcription factors Ubiquitin_Proteasome_system, E2: UBC ubiquitin protein ligase binding ubiquitin protein ligase activity ligase activity nucleus Ubiquitin_Proteasome_system, E3: RING regulation of transcription, DNA-templated zinc ion binding | details |
| CFinderADM001140 | isoleucyl-tRNA aminoacylation MAPK signaling pathway - fly isoleucine-tRNA ligase activity regulation of translational fidelity aminoacyl-tRNA editing activity protein import into nucleus nuclear envelope cytosol Ran GTPase binding Transcription_related, Transcription regulator: SET protein transporter activity Aminoacyl-tRNA biosynthesis signal transduction Ribosome biogenesis in eukaryotes Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| CFinderADM001381 | Homologous recombination DNA topological change DNA topoisomerase type I activity Ubiquitin_Proteasome_system, E3 adaptor: DWD DNA binding | details |
| CFinderADM001602 | protein kinase CK2 complex MAPK signaling pathway - fly protein kinase regulator activity regulation of protein kinase activity nuclear envelope Ran GTPase binding protein import into nucleus protein transporter activity Ribosome biogenesis in eukaryotes signal transduction kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc phosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |