CFinderADM001140's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| isoleucyl-tRNA aminoacylation | 2.56E-05 | GO:0006428 |
| MAPK signaling pathway - fly | 3.23E-05 | KEGG pathway |
| isoleucine-tRNA ligase activity | 6.14E-05 | GO:0004822 |
| regulation of translational fidelity | 6.65E-05 | GO:0006450 |
| aminoacyl-tRNA editing activity | 9.64E-05 | GO:0002161 |
| protein import into nucleus | 0.000143648 | GO:0006606 |
| nuclear envelope | 0.000194697 | GO:0005635 |
| cytosol | 0.000194697 | GO:0005829 |
| Ran GTPase binding | 0.000246022 | GO:0008536 |
| Transcription_related, Transcription regulator: SET | 0.000410442 | TF family |
| protein transporter activity | 0.000962661 | GO:0008565 |
| Aminoacyl-tRNA biosynthesis | 0.001189756 | KEGG pathway |
| signal transduction | 0.001333594 | GO:0007165 |
| Ribosome biogenesis in eukaryotes | 0.001389161 | KEGG pathway |
| Ubiquitin_Proteasome_system, E3 adaptor: DWD | 0.006505237 | ubs family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004316 | AT5G22480 (2.00E-09) | ZPR1 zinc-finger domain protein |
| CRO_T005461 | AT2G31660 (0) | EMA1|enhanced miRNA activity 1; SAD2|SUPER SENSITIVE TO ABA AND DROUGHT2; URM9|UNARMED 9 |
| CRO_T008427 | AT4G07410 (3.00E-97) | PCN|POPCORN |
| CRO_T025788 | AT4G10320 (8.00E-75) | tRNA synthetase class I (I, L, M and V) family protein |
| CRO_T029290 | AT5G42400 (6.00E-16) | ATXR7|ARABIDOPSIS TRITHORAX-RELATED7; SDG25|SET domain protein 25 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000236 | Mitophagy - animal MAPK signaling pathway - fly transcription factor TFIID complex cytosol THO complex part of transcription export complex GMP synthase activity GMP synthase (glutamine-hydrolyzing) activity Ubiquitin_Proteasome_system, E3 adaptor: DWD cell plate production of ta-siRNAs involved in RNA interference regulation of ethylene-activated signaling pathway GMP biosynthetic process cytokinin-activated signaling pathway mRNA export from nucleus L-tryptophan biosynthesis sphingolipid biosynthesis (plants) regulation of vesicle fusion activation of GTPase activity cytokinesis by cell plate formation DNA-templated transcription, initiation Protein_kinases_phosphatases, PPC:2.1.4: GmPK6/AtMRK1 Family nuclear envelope Insulin signaling pathway protein import into nucleus Rab GTPase binding exocyst jasmonic acid mediated signaling pathway Ran GTPase binding Basal transcription factors GTPase activator activity exocytosis translational initiation endomembrane system protein transporter activity small GTPase mediated signal transduction protein heterodimerization activity Endocytosis signal transduction translation initiation factor activity transferase activity, transferring glycosyl groups endosome intracellular protein transport Spliceosome | details |
| CFinderADM000479 | tRNA (cytosine-5-)-methyltransferase activity tRNA methylation Homologous recombination helicase activity Plant hormone signal transduction Ubiquitin_Proteasome_system, E3 adaptor: F-box RNA binding nucleic acid binding | details |
| CFinderADM000553 | MAPK signaling pathway - fly mitotic sister chromatid cohesion nuclear envelope protein import into nucleus Protein_kinases_phosphatases, PPC:2.1.4: GmPK6/AtMRK1 Family Transcription_related, Transcription regulator: SET Ran GTPase binding protein transporter activity signal transduction kinase activity phosphorylation Ubiquitin_Proteasome_system, E3: RING cytosol | details |
| CFinderADM000627 | aminoacyl-tRNA editing activity regulation of translational fidelity Aminoacyl-tRNA biosynthesis MAPK signaling pathway - fly valine-tRNA ligase activity valyl-tRNA aminoacylation isoleucyl-tRNA aminoacylation isoleucine-tRNA ligase activity mRNA processing embryo sac development protein import into nucleus Ran GTPase binding nuclear envelope cytosol rRNA processing protein transporter activity Ribosome biogenesis in eukaryotes signal transduction small-subunit processome ATP binding Ubiquitin_Proteasome_system, E3 adaptor: DWD nucleolus RNA binding | details |
| CFinderADM000628 | Toll and Imd signaling pathway MAPK signaling pathway - fly isoleucyl-tRNA aminoacylation protein K63-linked ubiquitination postreplication repair regulation of translational fidelity isoleucine-tRNA ligase activity mRNA processing embryo sac development protein import into nucleus aminoacyl-tRNA editing activity nuclear envelope cytosol Ran GTPase binding rRNA processing Ubiquitin_Proteasome_system, E2: UBC Aminoacyl-tRNA biosynthesis ubiquitin protein ligase binding protein transporter activity signal transduction small-subunit processome ligase activity ubiquitin protein ligase activity nucleolus Ubiquitin_Proteasome_system, E3 adaptor: DWD RNA binding | details |
| CFinderADM001602 | protein kinase CK2 complex MAPK signaling pathway - fly protein kinase regulator activity regulation of protein kinase activity nuclear envelope Ran GTPase binding protein import into nucleus protein transporter activity Ribosome biogenesis in eukaryotes signal transduction kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc phosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |