TissueCFM000091's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Ubiquitin_Proteasome_system, E3 adaptor: DWD | 0.001900565 | ubs family |
| mitochondrial respiratory chain complex IV assembly | 0.008843198 | GO:0033617 |
| glucose catabolic process | 0.008843198 | GO:0006007 |
| protein targeting | 0.008843198 | GO:0006605 |
| mitochondrial respiratory chain complex I assembly | 0.008843198 | GO:0032981 |
| glucan 1,3-alpha-glucosidase activity | 0.011797902 | GO:0033919 |
| DNA replication factor A complex | 0.016550028 | GO:0005662 |
| protein import into mitochondrial matrix | 0.017662897 | GO:0030150 |
| Prp19 complex | 0.022726049 | GO:0000974 |
| mitochondrial inner membrane presequence translocase complex | 0.022726049 | GO:0005744 |
| Cul4-RING E3 ubiquitin ligase complex | 0.022726049 | GO:0080008 |
| Transcriptional misregulation in cancers | 0.026761965 | KEGG pathway |
| precatalytic spliceosome | 0.034657646 | GO:0071011 |
| catalytic step 2 spliceosome | 0.037661386 | GO:0071013 |
| nucleosome | 0.037661386 | GO:0000786 |
| N-Glycan biosynthesis | 0.046134715 | KEGG pathway |
| mRNA splicing, via spliceosome | 0.04784158 | GO:0000398 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000971 | AT1G02330 (1.00E-80) | |
| CRO_T004154 | AT5G63840 (5.00E-97) | PSL5|PRIORITY IN SWEET LIFE 5; RSW3|RADIAL SWELLING 3 |
| CRO_T010105 | AT3G49660 (3.00E-21) | WDR5a|human WDR5 (WD40 repeat) homolog a |
| CRO_T012846 | AT2G03780 (9.00E-106) | Translin family protein |
| CRO_T014558 | AT4G40030 (1.00E-74) | H3.3|histone 3.3 |
| CRO_T014642 | AT5G13970 (4.00E-24) | unknown protein |
| CRO_T016943 | AT2G41500 (1.00E-20) | LIS|LACHESIS |
| CRO_T018011 | AT4G00026 (3.00E-66) | SD3|SEGREGATION DISTORTION 3 |
| CRO_T018911 | AT5G49210 (1.00E-30) | unknown protein |
| CRO_T027038 | - | - |
| CRO_T030807 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000501 | glucose catabolic process protein targeting Transcriptional misregulation in cancers N-terminal protein amino acid acetylation peptide alpha-N-acetyltransferase activity protein heterodimerization activity nucleosome protein acetyltransferase complex thylakoid | details |
| TissueCFM000785 | Fanconi anemia pathway solute:proton antiporter activity Transcription_related, Transcription factor: B3 | details |
| TissueCFM000803 | protein phosphorylation protein kinase activity ATP binding integral component of membrane Protein_kinases_phosphatases, PPC:1.10.1: Receptor Like Cytoplasmic Kinase VI Transcription_related, Transcription regulator: MBF1 microtubule minus-end binding transmembrane receptor protein tyrosine kinase activity protein serine/threonine kinase activity | details |
| TissueCFM001463 | Transcriptional misregulation in cancers oxalate catabolic process positive regulation of seed germination protein targeting glucose catabolic process seed coat development oxalate-CoA ligase activity 4-coumarate-CoA ligase activity defense response to fungus response to cytokinin cutin biosynthesis long-chain fatty acid activation oleate biosynthesis I (plants) palmitate biosynthesis II (bacteria and plants) phosphatidylcholine acyl editing sporopollenin precursors biosynthesis stearate biosynthesis II (bacteria and plants) suberin monomers biosynthesis protein heterodimerization activity 2-alkenal reductase [NAD(P)] activity | details |
| TissueCFM001615 | Protein_kinases_phosphatases, PPC:1.10.1: Receptor Like Cytoplasmic Kinase VI cortical cytoskeleton organization glucose catabolic process protein targeting Transcriptional misregulation in cancers microtubule cytoskeleton organization spindle nuclear chromatin nucleosome mRNA surveillance pathway protein dephosphorylation | details |
| TissueCFM001642 | interphase microtubule nucleation by interphase microtubule organizing center centrosome duplication meiotic nuclear division response to nematode detection of light stimulus glucose catabolic process protein targeting mitotic spindle assembly growth cortical microtubule organization microtubule minus-end binding signaling receptor activity gamma-tubulin binding intracellular transport cellular protein modification process Transcriptional misregulation in cancers Lysosome equatorial microtubule organizing center gamma-tubulin complex structural constituent of cytoskeleton membrane coat nucleosome protein heterodimerization activity protein transport | details |
Expression profiles
 Show details about module gene expression profiling |