TissueCFM000354's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| 2-alkenal reductase [NAD(P)] activity | 0.040208096 | GO:0032440 |
| kinase activity | 0.047509566 | GO:0016301 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T008559 | AT2G15320 (1.00E-19) | Leucine-rich repeat (LRR) family protein |
| CRO_T010159 | - | - |
| CRO_T017983 | - | - |
| CRO_T018068 | ATMG00860 (1.00E-15) | ORF158|DNA/RNA polymerases superfamily protein |
| CRO_T019284 | - | - |
| CRO_T031127 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000251 | 2-alkenal reductase [NAD(P)] activity kinase activity | details |
| TissueCFM000365 | seleno-amino acid biosynthesis protein depalmitoylation 'de novo' L-methionine biosynthetic process L-cystine L-cysteine-lyase (deaminating) L-cysteine desulfhydrase activity cystathionine gamma-lyase activity cystathionine beta-lyase activity palmitoyl-(protein) hydrolase activity Transcription_related, Transcription factor: C3H carboxylic ester hydrolase activity Base excision repair Glycerophospholipid metabolism Biosynthesis of amino acids 2-alkenal reductase [NAD(P)] activity | details |
| TissueCFM000403 | Transcription_related, Transcription factor: AP2 low-affinity nitrate transmembrane transporter activity low-affinity nitrate transport | details |
| TissueCFM000544 | intracellular part | details |
| TissueCFM000604 | Ubiquitin_Proteasome_system, DUB: OTU | details |
| TissueCFM000712 | cytoplasmic, membrane-bounded vesicle 2-alkenal reductase [NAD(P)] activity kinase activity | details |
| TissueCFM000713 | ent-kaurene biosynthesis I Diterpenoid biosynthesis terpene synthase activity | details |
| TissueCFM000777 | formation of glycosidic bonds, GlycosylTransferases: GTnc seleno-amino acid biosynthesis Various types of N-glycan biosynthesis cystathionine gamma-lyase activity L-cystine L-cysteine-lyase (deaminating) fucosyltransferase activity L-cysteine desulfhydrase activity cystathionine beta-lyase activity 'de novo' L-methionine biosynthetic process protein depalmitoylation fucosylation palmitoyl-(protein) hydrolase activity Golgi cisterna membrane biological regulation carboxylic ester hydrolase activity protein glycosylation Glycerophospholipid metabolism cell part Biosynthesis of amino acids 2-alkenal reductase [NAD(P)] activity protein binding | details |
| TissueCFM000946 | 2-alkenal reductase [NAD(P)] activity kinase activity | details |
| TissueCFM001086 | ABC transporters auxin influx transmembrane transporter activity taurine-transporting ATPase activity root hair elongation gravitropism amine transport basipetal auxin transport auxin efflux auxin influx xenobiotic transport auxin efflux transmembrane transporter activity xenobiotic-transporting ATPase activity Transcription_related, Transcription factor: MYB | details |
| TissueCFM001108 | 3-phosphoinositide biosynthesis D-myo-inositol (1,4,5)-trisphosphate biosynthesis Peroxisome | details |
| TissueCFM001128 | Golgi apparatus part bounding membrane of organelle intracellular transport Golgi vesicle transport membrane coat Ubiquitin_Proteasome_system, E3 adaptor: DWD protein transport | details |
| TissueCFM001230 | 2-alkenal reductase [NAD(P)] activity kinase activity | details |
| TissueCFM001441 | benzoate biosynthesis I (CoA-dependent, β-oxidative) Transcription_related, Transcription factor: bZIP Transcription_related, Transcription factor: NAC oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor MAPK signaling pathway - plant Plant hormone signal transduction | details |
| TissueCFM001449 | phosphatidylethanolamine biosynthesis I FoxO signaling pathway Protein digestion and absorption Ubiquitin_Proteasome_system, DUB: ULP Ubiquitin_Proteasome_system, DUB: USP Ubiquitin_Proteasome_system, E3: HECT very long chain fatty acid biosynthesis I Glycerophospholipid metabolism | details |
| TissueCFM001622 | 1,3-β-D-glucan biosynthesis Transcription_related, Transcription factor: CAMTA extrinsic component of endoplasmic reticulum membrane 1,3-beta-D-glucan synthase complex (1->3)-beta-D-glucan biosynthetic process protein targeting to vacuole Transcription_related, Transcription factor: C3H ER to Golgi vesicle-mediated transport 1,3-beta-D-glucan synthase activity | details |
| TissueCFM001669 | cellulose biosynthesis xyloglucan biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: LOB Transcription_related, Transcription factor: RWP-RK Transcription_related, Transcription factor: bHLH | details |
Expression profiles
 Show details about module gene expression profiling |