TissueCFM001108's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| 3-phosphoinositide biosynthesis | 0.019039808 | plantCyc |
| D-myo-inositol (1,4,5)-trisphosphate biosynthesis | 0.019039808 | plantCyc |
| Peroxisome | 0.020029198 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000090 | AT5G24240 (0) | Phosphatidylinositol 3- and 4-kinase ; Ubiquitin family protein |
| CRO_T009703 | - | - |
| CRO_T010159 | - | - |
| CRO_T011188 | - | - |
| CRO_T013687 | AT5G43740 (9.00E-27) | Disease resistance protein (CC-NBS-LRR class) family |
| CRO_T018057 | - | - |
| CRO_T019118 | - | - |
| CRO_T019148 | - | - |
| CRO_T022969 | - | - |
| CRO_T023001 | - | - |
| CRO_T027536 | - | - |
| CRO_T033792 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000070 | Transcription_related, Transcription factor: G2-like | details |
| TissueCFM000085 | details | |
| TissueCFM000208 | Diterpenoid biosynthesis ent-kaurene biosynthesis I | details |
| TissueCFM000265 | details | |
| TissueCFM000354 | 2-alkenal reductase [NAD(P)] activity kinase activity | details |
| TissueCFM000403 | Transcription_related, Transcription factor: AP2 low-affinity nitrate transmembrane transporter activity low-affinity nitrate transport | details |
| TissueCFM000417 | Brassinosteroid biosynthesis secondary metabolite biosynthetic process oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen heme binding iron ion binding gossypetin metabolism luteolin biosynthesis 3-phosphoinositide biosynthesis D-myo-inositol (1,4,5)-trisphosphate biosynthesis flavonol biosynthesis Peroxisome | details |
| TissueCFM000418 | 3-phosphoinositide biosynthesis D-myo-inositol (1,4,5)-trisphosphate biosynthesis Peroxisome kinase activity phosphorylation | details |
| TissueCFM000575 | details | |
| TissueCFM000713 | ent-kaurene biosynthesis I Diterpenoid biosynthesis terpene synthase activity | details |
| TissueCFM000755 | protein dephosphorylation | details |
| TissueCFM000848 | oxidoreductase activity, acting on NAD(P)H quinone binding NAD binding Oxidative phosphorylation | details |
| TissueCFM000854 | details | |
| TissueCFM000939 | details | |
| TissueCFM001032 | low-affinity nitrate transmembrane transporter activity low-affinity nitrate transport oligopeptide transport | details |
| TissueCFM001243 | binding | details |
| TissueCFM001646 | proteasome-mediated ubiquitin-dependent protein catabolic process ubiquitin protein ligase activity Ubiquitin_Proteasome_system, E3: RING zinc ion binding delta24-sterol reductase activity protein ubiquitination integral component of membrane lignin metabolic process 3-phosphoinositide biosynthesis D-myo-inositol (1,4,5)-trisphosphate biosynthesis plant sterol biosynthesis Steroid biosynthesis plant-type secondary cell wall biogenesis plasma membrane unidimensional cell growth protein polyubiquitination brassinosteroid biosynthetic process Peroxisome protein ubiquitination involved in ubiquitin-dependent protein catabolic process vacuolar membrane oxidoreductase activity, acting on CH-OH group of donors | details |
Expression profiles
 Show details about module gene expression profiling |