TissueCFM000591's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| peroxisomal importomer complex | 0.001950499 | GO:1990429 |
| integral component of peroxisomal membrane | 0.002924883 | GO:0005779 |
| protein C-terminus binding | 0.004048762 | GO:0008022 |
| protein monoubiquitination | 0.00521084 | GO:0006513 |
| embryonic morphogenesis | 0.00521084 | GO:0048598 |
| protein import into peroxisome matrix | 0.00521084 | GO:0016558 |
| fatty acid beta-oxidation | 0.00521084 | GO:0006635 |
| Peroxisome | 0.006014577 | KEGG pathway |
| Transcription_related, Transcription factor: ERF | 0.049664992 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007729 | AT5G18390 (5.00E-16) | Pentatricopeptide repeat (PPR) superfamily protein |
| CRO_T011401 | AT5G44210 (3.00E-19) | ATERF-9|ERF DOMAIN PROTEIN- 9; ATERF9|ERF DOMAIN PROTEIN 9 |
| CRO_T014743 | AT5G22820 (6.00E-40) | ARM repeat superfamily protein |
| CRO_T015715 | AT3G04460 (2.00E-153) | APM4|ABERRANT PEROXISOME MORPHOLOGY 4; ATPEX12|PEROXIN-12 |
| CRO_T016657 | AT3G54680 (9.00E-10) | proteophosphoglycan-related |
| CRO_T026094 | AT3G28970 (9.00E-72) | AAR3|antiauxin-resistant 3 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001225 | nucleotide binding ureide catabolic process purine nucleobase catabolic process allantoin catabolic process Spliceosome allantoin degradation to glyoxylate II allantoin degradation to ureidoglycolate II (ammonia producing) ureidoglycine aminohydrolase activity molybdenum cofactor biosynthesis Transcriptional misregulation in cancers nucleic acid binding Transcription_related, Transcription factor: C3H | details |
| TissueCFM001237 | L-tryptophan biosynthesis phosphate acquisition phosphoribosylanthranilate isomerase activity Transcription_related, Transcription factor: ERF tryptophan biosynthetic process acid phosphatase activity microtubule-severing ATPase activity | details |
| TissueCFM001358 | homogalacturonan degradation eukaryotic translation initiation factor 3 complex, eIF3m mRNA cleavage factor complex mRNA polyadenylation pollen germination innate immune response | details |
| TissueCFM001467 | Arp2/3 protein complex GPI-anchor transamidase complex trichome morphogenesis Arp2/3 complex-mediated actin nucleation attachment of GPI anchor to protein multidimensional cell growth CDP-diacylglycerol biosynthesis I diacylglycerol and triacylglycerol biosynthesis Autophagy - yeast Glycosylphosphatidylinositol(GPI)-anchor biosynthesis Glycerolipid metabolism | details |
| TissueCFM001668 | multivesicular body assembly intralumenal vesicle formation late endosome membrane ubiquitin binding transcription factor activity, sequence-specific DNA binding regulation of transcription, DNA-templated Transcription_related, Transcription factor: bZIP Transcription_related, Transcription factor: ERF metal ion binding | details |
Expression profiles
 Show details about module gene expression profiling |