TissueCFM001237's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| L-tryptophan biosynthesis | 0.01025486 | plantCyc |
| phosphate acquisition | 0.01025486 | plantCyc |
| phosphoribosylanthranilate isomerase activity | 0.017159316 | GO:0004640 |
| Transcription_related, Transcription factor: ERF | 0.022011556 | TF family |
| tryptophan biosynthetic process | 0.029510682 | GO:0000162 |
| acid phosphatase activity | 0.042783094 | GO:0003993 |
| microtubule-severing ATPase activity | 0.042783094 | GO:0008568 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004521 | AT1G78430 (5.00E-49) | RIP4|ROP interactive partner 4 |
| CRO_T010166 | AT2G34560 (3.00E-159) | CCP1|conserved in ciliated species and in the land plants 1 |
| CRO_T011401 | AT5G44210 (3.00E-19) | ATERF-9|ERF DOMAIN PROTEIN- 9; ATERF9|ERF DOMAIN PROTEIN 9 |
| CRO_T024163 | - | - |
| CRO_T024433 | - | - |
| CRO_T025539 | AT3G20500 (0) | ATPAP18|PURPLE ACID PHOSPHATASE 18 |
| CRO_T025582 | AT1G07780 (3.00E-50) | PAI1|phosphoribosylanthranilate isomerase 1; TRP6|TRANSIENT RECEPTOR POTENTIAL 6 |
| CRO_T029230 | AT2G03820 (0) | NMD3|Nonsense-Mediated mRNA Decay 3 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000591 | peroxisomal importomer complex integral component of peroxisomal membrane protein C-terminus binding protein monoubiquitination embryonic morphogenesis protein import into peroxisome matrix fatty acid beta-oxidation Peroxisome Transcription_related, Transcription factor: ERF | details |
| TissueCFM001358 | homogalacturonan degradation eukaryotic translation initiation factor 3 complex, eIF3m mRNA cleavage factor complex mRNA polyadenylation pollen germination innate immune response | details |
| TissueCFM001668 | multivesicular body assembly intralumenal vesicle formation late endosome membrane ubiquitin binding transcription factor activity, sequence-specific DNA binding regulation of transcription, DNA-templated Transcription_related, Transcription factor: bZIP Transcription_related, Transcription factor: ERF metal ion binding | details |
Expression profiles
 Show details about module gene expression profiling |