TissueCFM000678's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| ATG1/ULK1 kinase complex | 0.048729156 | GO:1990316 |
| cell plate | 0.048729156 | GO:0009504 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001937 | - | - |
| CRO_T002209 | AT2G27740 (3.00E-33) | Family of unknown function (DUF662) |
| CRO_T002279 | AT3G25130 (5.00E-20) | unknown protein |
| CRO_T002896 | AT1G13750 (7.00E-59) | Purple acid phosphatases superfamily protein |
| CRO_T007675 | AT3G11490 (4.00E-106) | rac GTPase activating protein |
| CRO_T011738 | AT4G06599 (1.00E-42) | ubiquitin family protein |
| CRO_T012437 | AT1G63310 (2.00E-17) | unknown protein |
| CRO_T012940 | AT1G25375 (3.00E-63) | Metallo-hydrolase/oxidoreductase superfamily protein |
| CRO_T013317 | AT3G45310 (1.00E-16) | Cysteine proteinases superfamily protein |
| CRO_T014116 | AT2G27140 (5.00E-15) | HSP20-like chaperones superfamily protein |
| CRO_T015731 | - | - |
| CRO_T018668 | - | - |
| CRO_T018774 | AT3G49590 (6.00E-109) | ATG13|autophagy-related 13 |
| CRO_T020647 | AT2G46225 (2.00E-35) | ABIL1|ABI-1-like 1 |
| CRO_T021492 | AT1G47330 (6.00E-155) | CBS domain-containing protein with a domain of unknown function (DUF21) |
| CRO_T026192 | AT1G01200 (4.00E-79) | ATRAB-A3|ARABIDOPSIS RAB GTPASE HOMOLOG A3; ATRABA3|RAB GTPase homolog A3 |
| CRO_T029571 | AT3G19640 (4.00E-144) | MGT4|magnesium transporter 4 |
| CRO_T031832 | AT3G56891 (2.00E-22) | Heavy metal transport/detoxification superfamily protein |
| CRO_T033340 | AT3G51610 (4.00E-42) | NPU|NO PRIMEXINE AND PLASMA MEMBRANE UNDULATION |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000233 | Tight junction succinate dehydrogenase (ubiquinone) activity homogalacturonan degradation Transcription_related, Transcription regulator: TRAF Lysosome tricarboxylic acid cycle electron transport chain regulation of catalytic activity hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Ubiquitin_Proteasome_system, E3 adaptor: BTB cysteine-type endopeptidase activity flavin adenine dinucleotide binding | details |
| TissueCFM000277 | magnesium ion transmembrane transporter activity magnesium ion transport magnesium ion transmembrane transport | details |
| TissueCFM000335 | hydrolase activity, acting on ester bonds triacylglycerol degradation | details |
| TissueCFM000775 | purine ribonucleoside monophosphate biosynthetic process adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc adenosine nucleotides degradation I deaminase activity triacylglycerol degradation RNA degradation Purine metabolism hydrolase activity, acting on ester bonds polysaccharide binding transporter activity hydrolase activity, hydrolyzing O-glycosyl compounds | details |
| TissueCFM000892 | proteolysis succinate dehydrogenase (ubiquinone) activity formation of glycosidic bonds, GlycosylTransferases: GTnc electron transport chain regulation of catalytic activity tricarboxylic acid cycle Lysosome cysteine-type endopeptidase activity flavin adenine dinucleotide binding serine-type endopeptidase activity | details |
| TissueCFM001422 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc anchored component of plasma membrane polysaccharide binding carbohydrate metabolic process production of small RNA involved in gene silencing by RNA negative regulation of nitrogen compound metabolic process regulation of primary metabolic process negative regulation of cellular macromolecule biosynthetic process regulation of gene expression, epigenetic glucan endo-1,3-beta-D-glucosidase activity hydrolase activity, hydrolyzing O-glycosyl compounds | details |
| TissueCFM001606 | IMP salvage AMP deaminase activity adenosine nucleotides degradation I integral component of mitochondrial outer membrane protein histidine kinase binding Purine metabolism response to abscisic acid embryo development ending in seed dormancy | details |
| TissueCFM001625 | details | |
| TissueCFM001695 | endosome trans-Golgi network cytokinin-O-glucosides biosynthesis Other types of O-glycan biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc pectic galactan metabolic process single organismal cell-cell adhesion simple leaf morphogenesis sphingomyelin phosphodiesterase D activity glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity UDP-glycosyltransferase activity glycosaminoglycan biosynthetic process regulation of auxin mediated signaling pathway heparan sulfate proteoglycan biosynthetic process Zeatin biosynthesis cell morphogenesis glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity SCF-dependent proteasomal ubiquitin-dependent protein catabolic process leaf vascular tissue pattern formation SCF ubiquitin ligase complex phloem or xylem histogenesis | details |
Expression profiles
 Show details about module gene expression profiling |