TissueCFM000892's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| proteolysis | 0.007259793 | GO:0006508 |
| succinate dehydrogenase (ubiquinone) activity | 0.007386615 | GO:0008177 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.013051924 | cazy family |
| electron transport chain | 0.013283142 | GO:0022900 |
| regulation of catalytic activity | 0.013632967 | GO:0050790 |
| tricarboxylic acid cycle | 0.013632967 | GO:0006099 |
| Lysosome | 0.019102303 | KEGG pathway |
| cysteine-type endopeptidase activity | 0.02359006 | GO:0004197 |
| flavin adenine dinucleotide binding | 0.035218196 | GO:0050660 |
| serine-type endopeptidase activity | 0.035218196 | GO:0004252 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000244 | AT4G10530 (1.00E-18) | Subtilase family protein |
| CRO_T011169 | AT5G66760 (1.00E-18) | SDH1-1|succinate dehydrogenase 1-1 |
| CRO_T012058 | AT1G11170 (1.00E-108) | Protein of unknown function (DUF707) |
| CRO_T012217 | AT2G23530 (4.00E-69) | Zinc-finger domain of monoamine-oxidase A repressor R1 |
| CRO_T013317 | AT3G45310 (1.00E-16) | Cysteine proteinases superfamily protein |
| CRO_T021820 | AT1G01110 (7.00E-16) | IQD18|IQ-domain 18 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000233 | Tight junction succinate dehydrogenase (ubiquinone) activity homogalacturonan degradation Transcription_related, Transcription regulator: TRAF Lysosome tricarboxylic acid cycle electron transport chain regulation of catalytic activity hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Ubiquitin_Proteasome_system, E3 adaptor: BTB cysteine-type endopeptidase activity flavin adenine dinucleotide binding | details |
| TissueCFM000678 | ATG1/ULK1 kinase complex cell plate | details |
| TissueCFM001264 | endocytic recycling protein homooligomerization response to UV-B hyperosmotic salinity response Endocytosis Ubiquitin mediated proteolysis damaged DNA binding manganese ion binding aminopeptidase activity DNA repair Ubiquitin_Proteasome_system, E3 adaptor: DWD Cul4-RING E3 ubiquitin ligase complex | details |
| TissueCFM001461 | meristem development aerobic respiration III (alternative oxidase pathway) alternative oxidase activity receptor serine/threonine kinase binding NAD+ ADP-ribosyltransferase activity aminopeptidase activity Transcription_related, Transcription factor: C2H2 manganese ion binding integral component of membrane respiratory chain mitochondrial inner membrane metal ion binding 2-alkenal reductase [NAD(P)] activity | details |
| TissueCFM001508 | D-myo-inositol (1,4,5)-trisphosphate degradation Protein_kinases_phosphatases, PPC:1.12.3: Leucine Rich Repeat Kinase VII Protein_kinases_phosphatases, PPC:1.13.3: Leucine Rich Repeat Kinase III exonuclease activity transmembrane receptor protein tyrosine kinase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Starch and sucrose metabolism phosphatidylinositol dephosphorylation endonuclease activity | details |
| TissueCFM001625 | details | |
| TissueCFM001748 | Fanconi anemia pathway integral component of membrane meristem development receptor serine/threonine kinase binding lignin catabolic process lignin biosynthetic process cellulose catabolic process DNA biosynthetic process adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 damaged DNA binding cellulase activity NAD+ ADP-ribosyltransferase activity DNA-directed DNA polymerase activity hydroquinone:oxygen oxidoreductase activity Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII Transcription_related, Transcription factor: C2H2 | details |
| TissueCFM001832 | γ-glutamyl cycle UDP-L-arabinose biosynthesis I (from UDP-xylose) kinase activity receptor serine/threonine kinase binding UDP-glucose 4-epimerase activity UDP-sugars interconversion simple leaf morphogenesis meristem development regulation of auxin mediated signaling pathway SCF ubiquitin ligase complex galactose metabolic process SCF-dependent proteasomal ubiquitin-dependent protein catabolic process leaf vascular tissue pattern formation Amino sugar and nucleotide sugar metabolism 2-alkenal reductase [NAD(P)] activity ubiquitin-protein transferase activity | details |
Expression profiles
 Show details about module gene expression profiling |