TissueCFM000743's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Ubiquitin_Proteasome_system, E2: UBC | 0.021747366 | ubs family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001236 | AT3G01450 (4.00E-92) | ARM repeat superfamily protein |
| CRO_T003550 | - | - |
| CRO_T003554 | - | - |
| CRO_T020704 | AT5G05080 (3.00E-21) | UBC22|ubiquitin-conjugating enzyme 22 |
| CRO_T020876 | AT1G19290 (2.00E-54) | Pentatricopeptide repeat (PPR) superfamily protein |
| CRO_T026854 | AT1G20230 (8.00E-78) | Pentatricopeptide repeat (PPR) superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000339 | Kdo transfer to lipid IVA I formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: Tify Lipopolysaccharide biosynthesis xylan biosynthetic process | details |
| TissueCFM000853 | cyclic pyranopterin monophosphate synthase activity Mo-molybdopterin cofactor biosynthetic process molybdopterin cofactor biosynthetic process Folate biosynthesis Basal transcription factors | details |
| TissueCFM000920 | xylan biosynthetic process phosphate acquisition Transcription_related, Transcription regulator: SWI/SNF-BAF60b Transcription_related, Transcription factor: C3H | details |
| TissueCFM001274 | One carbon pool by folate Signaling pathways regulating pluripotency of stem cells 5-formyltetrahydrofolate cyclo-ligase activity folate transformations II GARP complex retrograde transport, endosome to Golgi autophagy tetrahydrofolate interconversion folic acid-containing compound biosynthetic process organelle organization Autophagy - animal Ubiquitin_Proteasome_system, E2: UBC | details |
| TissueCFM001811 | Cysteine and methionine metabolism Ubiquitin_Proteasome_system, E2: UBC Transcription_related, Transcription factor: ERF heat shock protein binding | details |
Expression profiles
 Show details about module gene expression profiling |