TissueCFM000858's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| aerobic electron transport chain | 0.002127502 | GO:0019646 |
| cytochrome-c oxidase activity | 0.004425424 | GO:0004129 |
| hydrogen ion transmembrane transport | 0.018788351 | GO:1902600 |
| Oxidative phosphorylation | 0.043012277 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T014335 | AT2G07687 (3.00E-31) | Cytochrome c oxidase, subunit III |
| CRO_T017700 | - | - |
| CRO_T022494 | - | - |
| CRO_T022900 | - | - |
| CRO_T024401 | - | - |
| CRO_T030873 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000012 | ent-kaurene biosynthesis I Diterpenoid biosynthesis | details |
| TissueCFM000070 | Transcription_related, Transcription factor: G2-like | details |
| TissueCFM000071 | UDP-D-apiose biosynthesis (from UDP-D-glucuronate) UDP-D-xylose biosynthesis UDP-sugars interconversion UDP-glucuronate decarboxylase activity | details |
| TissueCFM000072 | details | |
| TissueCFM000075 | methylerythritol phosphate pathway II methylerythritol phosphate pathway I Terpenoid backbone biosynthesis secologanin and strictosidine biosynthesis terpenoid biosynthetic process isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway oxidation-reduction process monoterpenoid biosynthetic process geraniol and geranial biosynthesis acetaldehyde biosynthesis I pyruvate fermentation to ethanol II Transcription_related, Transcription factor: bHLH heme binding iron ion binding (3S)-linalool biosynthesis formaldehyde oxidation II (glutathione-dependent) geranyl diphosphate biosynthesis isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process steroid hormone mediated signaling pathway geranyl diphosphate metabolic process | details |
| TissueCFM000077 | details | |
| TissueCFM000394 | ent-kaurene biosynthesis I Diterpenoid biosynthesis zinc ion transmembrane transporter activity terpene synthase activity zinc II ion transmembrane transport | details |
| TissueCFM000434 | ent-kaurene biosynthesis I terpene synthase activity Diterpenoid biosynthesis Photosynthesis | details |
| TissueCFM000575 | details | |
| TissueCFM000658 | Transcription_related, Transcription factor: PLATZ | details |
| TissueCFM000755 | protein dephosphorylation | details |
| TissueCFM000880 | ent-kaurene biosynthesis I aerobic electron transport chain cytochrome-c oxidase activity terpene synthase activity Diterpenoid biosynthesis hydrogen ion transmembrane transport | details |
| TissueCFM001150 | glycogen (starch) synthase activity starch biosynthetic process amyloplast Starch and sucrose metabolism | details |
| TissueCFM001483 | Ran GTPase binding nuclear pore nuclear export signal receptor activity nucleobase-containing compound transmembrane transporter activity meristem initiation tRNA re-export from nucleus protein export from nucleus tRNA binding nuclear matrix flower development Proteasome RNA transport | details |
Expression profiles
 Show details about module gene expression profiling |