TissueCFM001223's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Cytochrome_P450, Cytochrome P450: CYP89A | 0.000472806 | CYP450 family |
| vernolate biosynthesis I | 0.005199793 | plantCyc |
| poly-hydroxy fatty acids biosynthesis | 0.008441801 | plantCyc |
| vindoline and vinblastine biosynthesis | 0.021133915 | plantCyc |
| substrate-specific transmembrane transporter activity | 0.045810776 | GO:0022891 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001707 | AT2G19170 (0) | SLP3|subtilisin-like serine protease 3 |
| CRO_T002866 | AT1G64940 (3.00E-150) | CYP89A6|cytochrome P450, family 87, subfamily A, polypeptide 6 |
| CRO_T006332 | AT1G27910 (2.00E-16) | ATPUB45|PLANT U-BOX 45 |
| CRO_T017197 | AT2G17440 (7.00E-106) | PIRL5|plant intracellular ras group-related LRR 5 |
| CRO_T018008 | AT1G25370 (0.000000002) | Protein of unknown function (DUF1639) |
| CRO_T027462 | - | - |
| CRO_T028549 | AT1G77210 (2.00E-167) | AtSTP14|sugar transport protein 14 |
| CRO_T031927 | AT4G10490 (6.00E-41) | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000310 | substrate-specific transmembrane transporter activity hexose transport transmembrane transport vindoline and vinblastine biosynthesis carbohydrate transport Ubiquitin_Proteasome_system, E3 adaptor: F-box | details |
| TissueCFM000661 | Plant-pathogen interaction response to symbiont nodulation regulation of nitrogen utilization regulation of phosphorylation regulation of fatty acid biosynthetic process | details |
| TissueCFM000750 | clathrin-mediated endocytosis clathrin heavy chain binding Transcription_related, Transcription factor: BBR-BPC leucopelargonidin and leucocyanidin biosynthesis phosphatidate metabolism, as a signaling molecule structural molecule activity clathrin vesicle coat Transcription_related, Transcription factor: GRAS | details |
| TissueCFM001059 | leucopelargonidin and leucocyanidin biosynthesis vindoline and vinblastine biosynthesis dioxygenase activity serine-type endopeptidase activity metal ion binding | details |
| TissueCFM001387 | Cytochrome_P450, Cytochrome P450: CYP89A vernolate biosynthesis I L-gulono-1,4-lactone dehydrogenase activity galactonolactone dehydrogenase activity poly-hydroxy fatty acids biosynthesis L-ascorbate biosynthesis I (L-galactose pathway) D-arabinono-1,4-lactone oxidase activity Ascorbate and aldarate metabolism Transcription_related, Transcription factor: bZIP Plant hormone signal transduction | details |
| TissueCFM001499 | leucopelargonidin and leucocyanidin biosynthesis phosphoprotein binding Transcription_related, Transcription factor: HB lipid binding dioxygenase activity | details |
| TissueCFM001836 | Cytochrome_P450, Cytochrome P450: CYP89A serine family amino acid biosynthetic process formate catabolic process vernolate biosynthesis I poly-hydroxy fatty acids biosynthesis Transcription_related, Transcription factor: NF-YC Glycosaminoglycan degradation formate dehydrogenase (NAD+) activity phosphoglycerate dehydrogenase activity | details |
Expression profiles
 Show details about module gene expression profiling |