TissueCFM001258's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| cation transmembrane transporter activity | 0.016187871 | GO:0008324 |
| alkaloid metabolic process | 0.017188179 | GO:0009820 |
| cation transmembrane transport | 0.017188179 | GO:0098655 |
| chaperone binding | 0.018197904 | GO:0051087 |
| S-adenosylmethionine-dependent methyltransferase activity | 0.031740633 | GO:0008757 |
| transferase activity, transferring acyl groups | 0.031740633 | GO:0016746 |
| cytoplasm | 0.032536906 | GO:0005737 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001587 | AT2G29410 (5.00E-40) | MTPB1|metal tolerance protein B1 |
| CRO_T004353 | AT5G07220 (3.00E-73) | ATBAG3|BCL-2-associated athanogene 3 |
| CRO_T013520 | AT5G37290 (2.00E-77) | ARM repeat superfamily protein |
| CRO_T015284 | AT1G60690 (1.00E-100) | NAD(P)-linked oxidoreductase superfamily protein |
| CRO_T017432 | AT1G78140 (3.00E-48) | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| CRO_T031910 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000637 | L-alpha-amino acid transmembrane transport L-amino acid transport cation transmembrane transporter activity L-amino acid transmembrane transporter activity cation transmembrane transport DNA biosynthetic process DNA-directed DNA polymerase activity | details |
| TissueCFM001093 | superpathway of proto- and siroheme biosynthesis heme O biosynthetic process protoheme IX farnesyltransferase activity Tyrosine metabolism chaperone binding Ubiquitin_Proteasome_system, E3 adaptor: F-box | details |
| TissueCFM001099 | L-phenylalanine catabolic process cinnamic acid biosynthetic process Phenylalanine metabolism Protein_kinases_phosphatases, PPC:1.1.3: Putative protein kinase/Putative receptor-like protein kinase trans-cinnamoyl-CoA biosynthesis phenylpropanoid biosynthesis, initial reactions adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 phenylalanine ammonia-lyase activity protein kinase activity ammonium transmembrane transporter activity ammonium transmembrane transport NF-kappa B signaling pathway suberin monomers biosynthesis very long chain fatty acid biosynthesis I | details |
| TissueCFM001187 | formation of glycosidic bonds, GlycosylTransferases: GTnc NADP+ binding steroid dehydrogenase activity alcohol dehydrogenase (NADP+) activity detoxification of reactive carbonyls in chloroplasts Basal transcription factors cation transmembrane transporter activity response to absence of light response to toxic substance response to red light response to far red light calcium-transporting ATPase activity cation transmembrane transport response to cold DNA-templated transcription, initiation calcium ion transmembrane transport nuclear body response to water deprivation response to salt stress translational initiation | details |
| TissueCFM001257 | formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: NF-YA galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity phospholipid:diacylglycerol acyltransferase activity cation transmembrane transporter activity system development triglyceride biosynthetic process cation transmembrane transport O-acyltransferase activity phospholipid remodeling (phosphatidylcholine, yeast) xylan biosynthesis Glycerolipid metabolism diacylglycerol and triacylglycerol biosynthesis | details |
| TissueCFM001717 | farnesol dehydrogenase activity farnesol metabolic process transmembrane transport ABC transporters Terpenoid backbone biosynthesis negative regulation of abscisic acid-activated signaling pathway Transcription_related, Transcription factor: MYB-related Ubiquitin_Proteasome_system, DUB: USP cellular protein metabolic process cysteine-type peptidase activity coenzyme binding | details |
Expression profiles
 Show details about module gene expression profiling |