TissueCFM001477's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| urate degradation to allantoin I | 0.000886394 | plantCyc |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.003190782 | cazy family |
| glycosaminoglycan biosynthetic process | 0.007506646 | GO:0006024 |
| protein homooligomerization | 0.007506646 | GO:0051260 |
| heparan sulfate proteoglycan biosynthetic process | 0.007506646 | GO:0015012 |
| glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity | 0.007819149 | GO:0001888 |
| glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity | 0.013025176 | GO:0050508 |
| Lysosome | 0.019102303 | KEGG pathway |
| regulation of translational initiation | 0.019270029 | GO:0006446 |
| formation of translation preinitiation complex | 0.019270029 | GO:0001731 |
| eukaryotic 48S preinitiation complex | 0.024888615 | GO:0033290 |
| eukaryotic 43S preinitiation complex | 0.024888615 | GO:0016282 |
| clathrin adaptor complex | 0.024888615 | GO:0030131 |
| eukaryotic translation initiation factor 3 complex | 0.024888615 | GO:0005852 |
| vesicle-mediated transport | 0.038420663 | GO:0016192 |
| RNA transport | 0.040243127 | KEGG pathway |
| translation initiation factor activity | 0.040434906 | GO:0003743 |
| heterocyclic compound binding | 0.040434906 | GO:1901363 |
| organic cyclic compound binding | 0.040434906 | GO:0097159 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000686 | AT1G01080 (3.00E-07) | RNA-binding (RRM/RBD/RNP motifs) family protein |
| CRO_T002206 | AT3G55830 (2.00E-104) | EPC1|ECTOPICALLY PARTING CELLS |
| CRO_T024748 | AT4G11420 (0) | EIF3A|eukaryotic translation initiation factor 3A |
| CRO_T026394 | AT3G10630 (5.00E-159) | UDP-Glycosyltransferase superfamily protein |
| CRO_T028051 | AT2G44920 (8.00E-04) | Tetratricopeptide repeat (TPR)-like superfamily protein |
| CRO_T029514 | AT1G10730 (0) | AP1M1|adaptor protein-1 mu-adaptin 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000131 | Transcription_related, Transcription factor: HB | details |
| TissueCFM000209 | biotin biosynthesis from 8-amino-7-oxononanoate I | details |
| TissueCFM000294 | details | |
| TissueCFM000369 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | details |
| TissueCFM001224 | protein demethylation purine nucleobase catabolic process ureide catabolic process allantoin catabolic process allantoin degradation to glyoxylate II allantoin degradation to ureidoglycolate II (ammonia producing) urate degradation to allantoin I protein homooligomerization molybdenum cofactor biosynthesis ureidoglycine aminohydrolase activity formation of glycosidic bonds, GlycosylTransferases: GTnc carboxylic ester hydrolase activity | details |
| TissueCFM001476 | urate degradation to allantoin I formation of glycosidic bonds, GlycosylTransferases: GTnc regulation of translational initiation formation of translation preinitiation complex cell wall organization or biogenesis | details |
Expression profiles
 Show details about module gene expression profiling |