TissueCFM000131's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: HB | 0.005049426 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000078 | - | - |
| CRO_T000686 | AT1G01080 (3.00E-07) | RNA-binding (RRM/RBD/RNP motifs) family protein |
| CRO_T004611 | - | - |
| CRO_T012943 | - | - |
| CRO_T013114 | - | - |
| CRO_T013789 | - | - |
| CRO_T014210 | - | - |
| CRO_T014580 | AT1G73360 (3.00E-13) | ATHDG11|HOMEODOMAIN GLABROUS 11; EDT1|ENHANCED DROUGHT TOLERANCE 1 |
| CRO_T015178 | - | - |
| CRO_T016524 | - | - |
| CRO_T016933 | - | - |
| CRO_T018515 | - | - |
| CRO_T019703 | AT4G32100 (2.00E-15) | Beta-1,3-N-Acetylglucosaminyltransferase family protein |
| CRO_T020674 | - | - |
| CRO_T021015 | - | - |
| CRO_T021751 | AT4G38020 (1.00E-40) | tRNA/rRNA methyltransferase (SpoU) family protein |
| CRO_T027271 | AT4G37790 (8.00E-39) | HAT22|Homeobox-leucine zipper protein family |
| CRO_T028489 | - | - |
| CRO_T028557 | - | - |
| CRO_T030542 | - | - |
| CRO_T030544 | - | - |
| CRO_T030773 | AT3G18860 (0) | transducin family protein / WD-40 repeat family protein |
| CRO_T030815 | - | - |
| CRO_T032545 | AT1G21560 (8.00E-14) | unknown protein |
| CRO_T032747 | - | - |
| CRO_T033245 | AT1G43690 (0) | ubiquitin interaction motif-containing protein |
| CRO_T033341 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000108 | lysyl-tRNA aminoacylation plasmodesma lysine-tRNA ligase activity single-organism metabolic process phosphatidylcholine acyl editing phospholipases phospholipid remodeling (phosphatidylcholine, yeast) cytosol Peroxisome Aminoacyl-tRNA biosynthesis Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| TissueCFM000153 | details | |
| TissueCFM000190 | proteolysis involved in cellular protein catabolic process translational initiation ATP hydrolysis coupled proton transport ATP synthesis coupled proton transport cysteine-type endopeptidase activity ribosome binding proton-transporting ATPase activity, rotational mechanism proton-transporting ATP synthase activity, rotational mechanism extracellular space proton-transporting ATP synthase complex, catalytic core F(1) Lysosome rRNA binding translation initiation factor activity Oxidative phosphorylation | details |
| TissueCFM000209 | biotin biosynthesis from 8-amino-7-oxononanoate I | details |
| TissueCFM000282 | histone methyltransferase activity (H3-K27 specific) regulation of DNA replication histone H3-K27 methylation DNA mediated transformation pollen development Transcription_related, Transcription regulator: PHD | details |
| TissueCFM000294 | details | |
| TissueCFM000369 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | details |
| TissueCFM000397 | cytoplasmic, membrane-bounded vesicle | details |
| TissueCFM001224 | protein demethylation purine nucleobase catabolic process ureide catabolic process allantoin catabolic process allantoin degradation to glyoxylate II allantoin degradation to ureidoglycolate II (ammonia producing) urate degradation to allantoin I protein homooligomerization molybdenum cofactor biosynthesis ureidoglycine aminohydrolase activity formation of glycosidic bonds, GlycosylTransferases: GTnc carboxylic ester hydrolase activity | details |
| TissueCFM001260 | Selenocompound metabolism methionyl-tRNA aminoacylation | details |
| TissueCFM001460 | megagametogenesis Photosynthesis | details |
| TissueCFM001476 | urate degradation to allantoin I formation of glycosidic bonds, GlycosylTransferases: GTnc regulation of translational initiation formation of translation preinitiation complex cell wall organization or biogenesis | details |
| TissueCFM001477 | urate degradation to allantoin I formation of glycosidic bonds, GlycosylTransferases: GTnc glycosaminoglycan biosynthetic process protein homooligomerization heparan sulfate proteoglycan biosynthetic process glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity Lysosome regulation of translational initiation formation of translation preinitiation complex eukaryotic 48S preinitiation complex eukaryotic 43S preinitiation complex clathrin adaptor complex eukaryotic translation initiation factor 3 complex vesicle-mediated transport RNA transport translation initiation factor activity heterocyclic compound binding organic cyclic compound binding | details |
| TissueCFM001661 | lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) inositol-1,4,5-trisphosphate 3-kinase activity RNA binding nucleotide binding sugar:proton symporter activity proton transport carbohydrate transport Inositol phosphate metabolism Spliceosome | details |
Expression profiles
 Show details about module gene expression profiling |