TissueCFM001691's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| diacylglycerol and triacylglycerol biosynthesis | 0.008482389 | plantCyc |
| N-Glycan biosynthesis | 0.00918654 | KEGG pathway |
| Protein_kinases_phosphatases, PPC:1.Other: Other Protein Kinase | 0.00974673 | kinase family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002958 | AT5G03080 (3.00E-87) | LPPgamma|lipid phosphate phosphatase gamma |
| CRO_T012967 | AT4G23060 (0.00000006) | IQD22|IQ-domain 22 |
| CRO_T019588 | - | - |
| CRO_T022523 | AT1G51910 (4.00E-26) | Leucine-rich repeat protein kinase family protein |
| CRO_T029256 | AT1G07840 (3.00E-71) | Sas10/Utp3/C1D family |
| CRO_T032431 | AT5G44030 (1.00E-21) | CESA4|cellulose synthase A4; IRX5|IRREGULAR XYLEM 5 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000809 | protein N-glycosylation (eukaryotic, high mannose) formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.Other: Other Protein Kinase Transcription_related, Transcription regulator: SET histone lysine methylation Base excision repair Lysine degradation N-Glycan biosynthesis nuclease activity histone-lysine N-methyltransferase activity chromosome histone binding cellular process embryo development ending in seed dormancy | details |
| TissueCFM000950 | cellulose synthase (UDP-forming) activity cellulose biosynthetic process cell wall organization N-Glycan biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.9.3: Putative receptor like protein kinase Ubiquitin_Proteasome_system, E3: RING | details |
| TissueCFM001002 | Transcription_related, Transcription factor: G2-like SNARE complex disassembly soluble NSF attachment protein activity syntaxin binding membrane fusion Autophagy - yeast MAPK signaling pathway Proteasome maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | details |
| TissueCFM001093 | superpathway of proto- and siroheme biosynthesis heme O biosynthetic process protoheme IX farnesyltransferase activity Tyrosine metabolism chaperone binding Ubiquitin_Proteasome_system, E3 adaptor: F-box | details |
| TissueCFM001282 | Basal transcription factors Ras signaling pathway early endosome membrane DNA-templated transcription, initiation exocytosis protein transport vesicle fusion translational initiation small GTPase mediated signal transduction | details |
| TissueCFM001692 | tissue development regulation of response to stimulus anatomical structure morphogenesis cellular response to stimulus plant organ development response to organic substance response to bacterium Transcription_related, Transcription factor: MYB-related Ubiquitin_Proteasome_system, DUB: USP response to osmotic stress defense response to other organism cellular protein metabolic process maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ABC transporters | details |
| TissueCFM001722 | bundle sheath cell fate specification diacylglycerol and triacylglycerol biosynthesis N-Glycan biosynthesis Transcription_related, Transcription regulator: GNAT leaf development N-terminal protein amino acid acetylation Transcription_related, Transcription factor: GRAS N-acetyltransferase activity | details |
| TissueCFM001727 | Influenza A diacylglycerol and triacylglycerol biosynthesis N-Glycan biosynthesis cellular oxidant detoxification peroxidase activity | details |
Expression profiles
 Show details about module gene expression profiling |