TissueCFM001801's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Drug metabolism - cytochrome P450 | 0.002659181 | KEGG pathway |
| phytate degradation I | 0.006107988 | plantCyc |
| xylogalacturonan biosynthesis | 0.006107988 | plantCyc |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.006191018 | cazy family |
| Plant-pathogen interaction | 0.020104048 | KEGG pathway |
| membrane | 0.040646932 | GO:0016020 |
| transferase activity, transferring acyl groups | 0.0424824 | GO:0016746 |
| N,N-dimethylaniline monooxygenase activity | 0.0424824 | GO:0004499 |
| NADP binding | 0.0424824 | GO:0050661 |
| acid phosphatase activity | 0.0424824 | GO:0003993 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007965 | AT5G20660 (5.00E-80) | Zn-dependent exopeptidases superfamily protein |
| CRO_T013489 | AT3G52820 (2.00E-78) | ATPAP22|PURPLE ACID PHOSPHATASE 22 |
| CRO_T018867 | AT3G07620 (2.00E-21) | Exostosin family protein |
| CRO_T024234 | AT2G33230 (4.00E-14) | YUC7|YUCCA 7 |
| CRO_T026411 | AT1G34500 (4.00E-69) | MBOAT (membrane bound O-acyl transferase) family protein |
| CRO_T031695 | AT3G21630 (7.00E-44) | CERK1|chitin elicitor receptor kinase 1; LYK1|LysM-containing receptor-like kinase 1; LYSM RLK1|LYSM DOMAIN RECEPTOR-LIKE KINASE 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001041 | thioredoxin pathway lipid homeostasis fatty acid beta-oxidation using acyl-CoA dehydrogenase glycyl-tRNA aminoacylation Aminoacyl-tRNA biosynthesis fatty-acyl-CoA binding glycine-tRNA ligase activity oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor acyl-CoA dehydrogenase activity | details |
| TissueCFM001270 | Drug metabolism - cytochrome P450 plastoglobule serine-type endopeptidase inhibitor activity negative regulation of endopeptidase activity response to wounding N,N-dimethylaniline monooxygenase activity ATPase activity NADP binding flavin adenine dinucleotide binding | details |
| TissueCFM001308 | wobble position cytosine ribose methylation wobble position uridine ribose methylation chloroplast envelope chloroplast stroma xylogalacturonan biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc alditol:NADP+ 1-oxidoreductase activity thylakoid transferase activity, transferring acyl groups peptidase activity methyltransferase activity | details |
| TissueCFM001457 | Drug metabolism - cytochrome P450 sulfate adenylyltransferase (ATP) activity 4-coumarate-CoA ligase activity adenylylsulfate kinase activity sulfate activation for sulfonation sulfate reduction II (assimilatory) phenylpropanoid metabolic process Phenylalanine metabolism Sulfur metabolism N,N-dimethylaniline monooxygenase activity formation of glycosidic bonds, GlycosylTransferases: GTnc 4-hydroxybenzoate biosynthesis I (eukaryotes) umbelliferone biosynthesis Protein export Flavonoid biosynthesis sulfate assimilation suberin monomers biosynthesis NADP binding Phenylpropanoid biosynthesis protein transport | details |
| TissueCFM001592 | Drug metabolism - cytochrome P450 phytate degradation I xylogalacturonan biosynthesis metal ion binding protein kinase activity N,N-dimethylaniline monooxygenase activity Protein export Plant-pathogen interaction | details |
| TissueCFM001630 | benzoate biosynthesis I (CoA-dependent, β-oxidative) Plant-pathogen interaction clathrin coat assembly NLS-bearing protein import into nucleus clathrin-coated vesicle nucleoplasm nuclear pore 1-phosphatidylinositol binding clathrin binding nuclear localization sequence binding | details |
| TissueCFM001693 | positive regulation of gibberellic acid mediated signaling pathway floral organ morphogenesis glutathione catabolic process gibberellin mediated signaling pathway glutathione gamma-glutamylcysteinyltransferase activity gamma-glutamyltransferase activity glutathione degradation phytochelatins biosynthesis Arachidonic acid metabolism phytate degradation I Ubiquitin_Proteasome_system, E1: ThiF formation of glycosidic bonds, GlycosylTransferases: GTnc acid phosphatase activity benzoate biosynthesis I (CoA-dependent, β-oxidative) Plant hormone signal transduction dephosphorylation vacuole | details |
| TissueCFM001714 | methyltransferase activity wobble position cytosine ribose methylation wobble position uridine ribose methylation tRNA wobble position uridine thiolation sulfurtransferase activity alditol:NADP+ 1-oxidoreductase activity formation of glycosidic bonds, GlycosylTransferases: GTnc L-alanine biosynthesis III molybdenum cofactor biosynthesis photosynthesis light reactions xylogalacturonan biosynthesis photosystem II oxygen evolving complex extrinsic component of membrane thylakoid lumen transferase activity, transferring acyl groups Photosynthesis | details |
| TissueCFM001804 | Drug metabolism - cytochrome P450 serine-type endopeptidase inhibitor activity negative regulation of endopeptidase activity Transcription_related, Transcription factor: C3H Transcription_related, Transcription factor: WRKY response to wounding Plant-pathogen interaction N,N-dimethylaniline monooxygenase activity multicellular organism development | details |
| TissueCFM001809 | Drug metabolism - cytochrome P450 phytate degradation I pyruvate fermentation to ethanol II xylogalacturonan biosynthesis Glycolysis / Gluconeogenesis formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: WRKY Plant-pathogen interaction N,N-dimethylaniline monooxygenase activity thiamine pyrophosphate binding carboxy-lyase activity | details |
| TissueCFM001816 | Drug metabolism - cytochrome P450 Riboflavin metabolism formation of glycosidic bonds, GlycosylTransferases: GTnc D-myo-inositol (1,4,5)-trisphosphate degradation flavin biosynthesis I (bacteria and plants) xylogalacturonan biosynthesis phosphatidylinositol dephosphorylation exonuclease activity N,N-dimethylaniline monooxygenase activity endonuclease activity nucleic acid phosphodiester bond hydrolysis NADP binding oxidation-reduction process flavin adenine dinucleotide binding | details |
| TissueCFM001834 | Drug metabolism - cytochrome P450 floral organ morphogenesis gibberellin mediated signaling pathway positive regulation of gibberellic acid mediated signaling pathway phytate degradation I xylogalacturonan biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc benzoate biosynthesis I (CoA-dependent, β-oxidative) N,N-dimethylaniline monooxygenase activity acid phosphatase activity NADP binding Plant hormone signal transduction | details |
Expression profiles
 Show details about module gene expression profiling |