TreatCFM000117's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001668 | - | - |
| CRO_T006496 | - | - |
| CRO_T007979 | - | - |
| CRO_T008525 | - | - |
| CRO_T011314 | - | - |
| CRO_T011914 | - | - |
| CRO_T012216 | - | - |
| CRO_T012312 | - | - |
| CRO_T012381 | - | - |
| CRO_T015127 | - | - |
| CRO_T016022 | - | - |
| CRO_T016531 | AT2G32670 (5.00E-87) | ATVAMP725|vesicle-associated membrane protein 725 |
| CRO_T017773 | AT1G16360 (3.00E-17) | LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein |
| CRO_T019999 | AT3G23400 (3.00E-68) | FIB4|fibrillin 4 |
| CRO_T020426 | - | - |
| CRO_T021236 | - | - |
| CRO_T021365 | - | - |
| CRO_T021636 | - | - |
| CRO_T022462 | - | - |
| CRO_T024677 | - | - |
| CRO_T028377 | - | - |
| CRO_T030226 | - | - |
| CRO_T030490 | - | - |
| CRO_T031557 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000015 | allantoin degradation to glyoxylate II allantoin degradation to ureidoglycolate II (ammonia producing) phytol salvage pathway | details |
| TreatCFM000059 | Amino sugar and nucleotide sugar metabolism cell wall macromolecule catabolic process chitinase activity chitin binding chitin catabolic process homogalacturonan biosynthesis | details |
| TreatCFM000060 | cellular potassium ion homeostasis plant-type vacuole membrane voltage-gated potassium channel activity Transcription_related, Transcription factor: B3 potassium ion transmembrane transport | details |
| TreatCFM000132 | Glutathione metabolism | details |
| TreatCFM000133 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc regulation of cell cycle | details |
| TreatCFM000241 | phytol salvage pathway phytol kinase activity | details |
| TreatCFM000294 | phytol salvage pathway phytol kinase activity vitamin E biosynthetic process chloroplast DNA-directed RNA polymerase activity Purine metabolism | details |
| TreatCFM000299 | L-tyrosine biosynthesis II Mannose type O-glycan biosyntheis Other types of O-glycan biosynthesis tyrosine biosynthetic process histone exchange regulation of nitric-oxide synthase activity | details |
| TreatCFM000310 | Cyanoamino acid metabolism cyanide biosynthetic process protein methylation | details |
| TreatCFM000340 | details | |
| TreatCFM000345 | DNA-directed RNA polymerase activity Purine metabolism protein methyltransferase activity protein methylation Transcription_related, Transcription factor: HB | details |
| TreatCFM000789 | Taurine and hypotaurine metabolism Golgi stack anaerobic respiration Golgi to plasma membrane protein transport Golgi vesicle docking detection of hypoxia peptidyl-cysteine oxidation Autophagy - yeast intra-Golgi vesicle-mediated transport SNARE complex vesicle fusion exocytosis nucleic acid phosphodiester bond hydrolysis oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen SNAP receptor activity SNARE binding endonuclease activity ATPase activity | details |
| TreatCFM001070 | details | |
| TreatCFM001668 | helicase activity nucleic acid binding exocytosis vesicle fusion nucleic acid phosphodiester bond hydrolysis endonuclease activity SNARE binding SNAP receptor activity SNARE complex Spliceosome | details |
Expression profiles
 Show details about module gene expression profiling |