TreatCFM000431's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| actin cytoskeleton | 0.006201457 | GO:0015629 |
| actin filament depolymerization | 0.009097083 | GO:0030042 |
| Regulation of actin cytoskeleton | 0.014865034 | KEGG pathway |
| defense response | 0.040575693 | GO:0006952 |
| protein folding | 0.040575693 | GO:0006457 |
| actin binding | 0.043094402 | GO:0003779 |
| unfolded protein binding | 0.043094402 | GO:0051082 |
| transferase activity, transferring acyl groups | 0.043094402 | GO:0016746 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001260 | AT1G01750 (3.00E-55) | ADF11|actin depolymerizing factor 11 |
| CRO_T004427 | AT2G20230 (2.00E-17) | Tetraspanin family protein |
| CRO_T006386 | AT1G11040 (5.00E-42) | HSP40/DnaJ peptide-binding protein |
| CRO_T008229 | AT5G64200 (1.00E-10) | At-SC35|ortholog of human splicing factor SC35 |
| CRO_T019666 | - | - |
| CRO_T026497 | AT1G34520 (2.00E-63) | MBOAT (membrane bound O-acyl transferase) family protein |
| CRO_T031790 | AT3G15810 (8.00E-20) | Protein of unknown function (DUF567) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000176 | formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: ARF Transcription_related, Transcription factor: LOB Glycosylphosphatidylinositol(GPI)-anchor biosynthesis glucuronosyltransferase activity phosphomannomutase activity acyl-CoA hydrolysis GDP-glucose biosynthesis GDP-mannose biosynthesis glucose and glucose-1-phosphate degradation UDP-glucose biosynthesis L-ascorbate biosynthesis I (L-galactose pathway) starch biosynthesis sucrose biosynthesis II acetylglucosaminyltransferase activity iron-sulfur cluster binding cutin biosynthesis sporopollenin precursors biosynthesis suberin monomers biosynthesis | details |
| TreatCFM001305 | Ubiquitin_Proteasome_system, DUB: JAMM regulation of root morphogenesis adenosine ribonucleotides de novo biosynthesis actin filament depolymerization response to hormone actin cytoskeleton ATP synthesis coupled proton transport proton-transporting ATP synthase complex, catalytic core F(1) AMPK signaling pathway Regulation of actin cytoskeleton proton-transporting ATP synthase activity, rotational mechanism proton-transporting ATPase activity, rotational mechanism actin binding | details |
| TreatCFM001641 | Protein_kinases_phosphatases, PPC:1.5.3: Receptor Like Cytoplasmic Kinase IV glutaminyl-tRNAgln biosynthesis via transamidation Transcription_related, Transcription regulator: LIM homogalacturonan biosynthesis isoflavonoid biosynthesis II pectin biosynthetic process spliceosomal snRNP assembly G-protein coupled receptor signaling pathway oligopeptide transport formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase | details |
| TreatCFM001700 | Protein_kinases_phosphatases, PPC:2.1.3: CTR1/EDR1 Kinase pyrimidine nucleotide biosynthetic process 'de novo' pyrimidine nucleobase biosynthetic process nucleotide phosphorylation iron-sulfur cluster assembly acyl-CoA hydrolysis CMP phosphorylation pyrimidine deoxyribonucleotide phosphorylation UTP and CTP de novo biosynthesis cytidylate kinase activity uridylate kinase activity cutin biosynthesis pyrimidine ribonucleotides interconversion sporopollenin precursors biosynthesis suberin monomers biosynthesis Pyrimidine metabolism iron-sulfur cluster binding | details |
| TreatCFM002059 | red chlorophyll catabolite reductase activity phosphomannomutase activity carbohydrate phosphatase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Transcription_related, Transcription regulator: LIM regulation of plant-type hypersensitive response defense response, incompatible interaction starch metabolic process protein tyrosine/serine/threonine phosphatase activity phosphate ion transport Circadian rhythm chlorophyll catabolic process chlorophyll a degradation II GDP-glucose biosynthesis GDP-mannose biosynthesis glucose and glucose-1-phosphate degradation starch degradation II UDP-glucose biosynthesis L-ascorbate biosynthesis I (L-galactose pathway) starch biosynthesis sucrose biosynthesis II Porphyrin and chlorophyll metabolism ER to Golgi vesicle-mediated transport | details |
| TreatCFM002128 | anthocyanidin modification (Arabidopsis) Herpes simplex infection Fanconi anemia pathway ether hydrolase activity myosin heavy chain kinase activity | details |
Expression profiles
 Show details about module gene expression profiling |