TreatCFM000478's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Ubiquitin_Proteasome_system, E2: UBC | 0.007249122 | ubs family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T015906 | - | - |
| CRO_T016042 | - | - |
| CRO_T020704 | AT5G05080 (3.00E-21) | UBC22|ubiquitin-conjugating enzyme 22 |
| CRO_T022636 | - | - |
| CRO_T029190 | AT3G61770 (2.00E-83) | Acid phosphatase/vanadium-dependent haloperoxidase-related protein |
| CRO_T029378 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000002 | phosphogluconate dehydrogenase (decarboxylating) activity NAD binding | details |
| TreatCFM000036 | adenosylmethionine decarboxylase activity spermidine biosynthetic process spermine biosynthetic process spermidine biosynthesis I spermine biosynthesis Cysteine and methionine metabolism Transcription_related, Transcription factor: NAC | details |
| TreatCFM000068 | Ubiquitin_Proteasome_system, E2: UBC | details |
| TreatCFM000099 | Spliceosome sulfate activation for sulfonation sulfate reduction II (assimilatory) Transcription_related, Transcription factor: NAC Ubiquitin_Proteasome_system, DUB: JAMM HTLV-I infection L-valine degradation I | details |
| TreatCFM000101 | ajmaline and sarpagine biosynthesis RNA-dependent DNA biosynthetic process RNA-directed DNA polymerase activity Transcription_related, Transcription factor: C2H2 DNA integration DNA recombination | details |
| TreatCFM000125 | Ubiquitin_Proteasome_system, E2: UBC organic substance metabolic process primary metabolic process cellular metabolic process nitrogen compound metabolic process | details |
| TreatCFM000187 | intracellular part response to biotic stimulus defense response Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| TreatCFM000188 | Basal transcription factors Ubiquitin_Proteasome_system, E3 adaptor: DWD catalytic activity | details |
| TreatCFM000197 | Transcription_related, Transcription factor: WRKY MAPK signaling pathway - plant | details |
| TreatCFM000246 | Legionellosis rRNA (adenine-N6,N6-)-dimethyltransferase activity Transcription_related, Transcription factor: SBP Transcription_related, Transcription factor: MYB-related rRNA methylation cell fate specification substrate-specific transmembrane transporter activity carbohydrate transport ER to Golgi vesicle-mediated transport cell division small GTPase mediated signal transduction | details |
| TreatCFM000301 | vindoline and vinblastine biosynthesis mRNA surveillance pathway | details |
| TreatCFM000318 | details | |
| TreatCFM000346 | DNA integration plastid | details |
| TreatCFM000417 | secondary active sulfate transmembrane transporter activity sulfate transmembrane transport integral component of plasma membrane kinase activity | details |
| TreatCFM000509 | Protein_kinases_phosphatases, PPC:4.4.1: Unknown Function Kinase guiding stereospecific synthesis activity regulation of catalytic activity phenylpropanoid biosynthetic process | details |
| TreatCFM000566 | regulation of meristem structural organization Ubiquitin_Proteasome_system, E2: UBC protein kinase binding protein dephosphorylation signal transduction | details |
| TreatCFM000635 | DNA mediated transformation Viral carcinogenesis | details |
| TreatCFM000760 | details | |
| TreatCFM000927 | details | |
| TreatCFM001059 | quercetin 7-O-glucosyltransferase activity quercetin 3-O-glucosyltransferase activity flavonoid biosynthetic process flavonoid glucuronidation | details |
| TreatCFM001861 | post-embryonic root development ether hydrolase activity Adherens junction xyloglucan biosynthesis PPAR signaling pathway MAPK signaling pathway - yeast protein domain specific binding formation of glycosidic bonds, GlycosylTransferases: GTnc Ubiquitin_Proteasome_system, E2: UBC | details |
Expression profiles
 Show details about module gene expression profiling |