TreatCFM001059's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| quercetin 7-O-glucosyltransferase activity | 0.019051569 | GO:0080044 |
| quercetin 3-O-glucosyltransferase activity | 0.019051569 | GO:0080043 |
| flavonoid biosynthetic process | 0.023257748 | GO:0009813 |
| flavonoid glucuronidation | 0.023257748 | GO:0052696 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003478 | AT5G61190 (1.00E-05) | putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain |
| CRO_T007607 | AT5G49690 (1.00E-134) | UDP-Glycosyltransferase superfamily protein |
| CRO_T015724 | AT3G55350 (4.00E-24) | PIF / Ping-Pong family of plant transposases |
| CRO_T016788 | - | - |
| CRO_T026733 | AT3G05700 (6.00E-23) | Drought-responsive family protein |
| CRO_T029190 | AT3G61770 (2.00E-83) | Acid phosphatase/vanadium-dependent haloperoxidase-related protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000002 | phosphogluconate dehydrogenase (decarboxylating) activity NAD binding | details |
| TreatCFM000015 | allantoin degradation to glyoxylate II allantoin degradation to ureidoglycolate II (ammonia producing) phytol salvage pathway | details |
| TreatCFM000036 | adenosylmethionine decarboxylase activity spermidine biosynthetic process spermine biosynthetic process spermidine biosynthesis I spermine biosynthesis Cysteine and methionine metabolism Transcription_related, Transcription factor: NAC | details |
| TreatCFM000099 | Spliceosome sulfate activation for sulfonation sulfate reduction II (assimilatory) Transcription_related, Transcription factor: NAC Ubiquitin_Proteasome_system, DUB: JAMM HTLV-I infection L-valine degradation I | details |
| TreatCFM000100 | Transcription_related, Transcription factor: WRKY Galactose metabolism | details |
| TreatCFM000101 | ajmaline and sarpagine biosynthesis RNA-dependent DNA biosynthetic process RNA-directed DNA polymerase activity Transcription_related, Transcription factor: C2H2 DNA integration DNA recombination | details |
| TreatCFM000102 | RNA-dependent DNA biosynthetic process RNA-directed DNA polymerase activity DNA integration DNA recombination aspartic-type endopeptidase activity | details |
| TreatCFM000183 | calcium ion transport Ubiquitin_Proteasome_system, DUB: JAMM Proteasome proteasome-mediated ubiquitin-dependent protein catabolic process proteasome complex | details |
| TreatCFM000187 | intracellular part response to biotic stimulus defense response Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| TreatCFM000188 | Basal transcription factors Ubiquitin_Proteasome_system, E3 adaptor: DWD catalytic activity | details |
| TreatCFM000197 | Transcription_related, Transcription factor: WRKY MAPK signaling pathway - plant | details |
| TreatCFM000246 | Legionellosis rRNA (adenine-N6,N6-)-dimethyltransferase activity Transcription_related, Transcription factor: SBP Transcription_related, Transcription factor: MYB-related rRNA methylation cell fate specification substrate-specific transmembrane transporter activity carbohydrate transport ER to Golgi vesicle-mediated transport cell division small GTPase mediated signal transduction | details |
| TreatCFM000279 | Ubiquitin_Proteasome_system, DUB: JAMM Golgi vesicle budding phospholipid translocation Proteasome phospholipid-translocating ATPase activity proteasome-mediated ubiquitin-dependent protein catabolic process proteasome complex | details |
| TreatCFM000301 | vindoline and vinblastine biosynthesis mRNA surveillance pathway | details |
| TreatCFM000318 | details | |
| TreatCFM000333 | details | |
| TreatCFM000334 | L-amino acid transport L-alpha-amino acid transmembrane transport L-amino acid transmembrane transporter activity protein disulfide isomerase activity antiporter activity cell redox homeostasis | details |
| TreatCFM000335 | chromosome organization DNA metabolic process helicase activity | details |
| TreatCFM000342 | integral component of membrane chloroplast inner membrane ATP synthesis coupled electron transport photosynthesis, light reaction hydrogen ion transmembrane transporter activity quinone binding carbohydrate binding NADH dehydrogenase (ubiquinone) activity hydrogen ion transmembrane transport Photosynthesis | details |
| TreatCFM000346 | DNA integration plastid | details |
| TreatCFM000403 | Ubiquitin_Proteasome_system, DUB: JAMM proteasome complex Proteasome proteasome-mediated ubiquitin-dependent protein catabolic process | details |
| TreatCFM000415 | 3'-5'-exoribonuclease activity U6 snRNA 3'-end processing mRNA processing RNA splicing RNA phosphodiester bond hydrolysis, exonucleolytic ion transport single-organism process | details |
| TreatCFM000416 | Ubiquitin_Proteasome_system, DUB: JAMM proteasome complex Proteasome proteasome-mediated ubiquitin-dependent protein catabolic process | details |
| TreatCFM000417 | secondary active sulfate transmembrane transporter activity sulfate transmembrane transport integral component of plasma membrane kinase activity | details |
| TreatCFM000478 | Ubiquitin_Proteasome_system, E2: UBC | details |
| TreatCFM000509 | Protein_kinases_phosphatases, PPC:4.4.1: Unknown Function Kinase guiding stereospecific synthesis activity regulation of catalytic activity phenylpropanoid biosynthetic process | details |
| TreatCFM000563 | DNA mediated transformation Transcription_related, Transcription factor: WRKY amino acid transmembrane transport Viral carcinogenesis MAPK signaling pathway - plant | details |
| TreatCFM000622 | serine-type carboxypeptidase activity | details |
| TreatCFM000635 | DNA mediated transformation Viral carcinogenesis | details |
| TreatCFM000699 | cell death L-amino acid transport leaf senescence L-alpha-amino acid transmembrane transport ethylene biosynthetic process L-amino acid transmembrane transporter activity protein disulfide isomerase activity Spliceosome Ubiquitin_Proteasome_system, E3 adaptor: F-box cell redox homeostasis defense response viral nucleocapsid cell intracellular ribonucleoprotein complex antiporter activity | details |
| TreatCFM000760 | details | |
| TreatCFM000830 | MAPK signaling pathway - yeast Transcriptional misregulation in cancers positive regulation of phosphorylation of RNA polymerase II C-terminal domain positive regulation of cyclin-dependent protein serine/threonine kinase activity Golgi vesicle budding post-embryonic root development phospholipid translocation positive regulation of transcription from RNA polymerase II promoter protein domain specific binding phospholipid-translocating ATPase activity cyclin-dependent protein serine/threonine kinase regulator activity cyclin-dependent protein kinase holoenzyme complex | details |
| TreatCFM000863 | mRNA surveillance pathway | details |
| TreatCFM000927 | details | |
| TreatCFM001194 | formation of glycosidic bonds, GlycosylTransferases: GTnc integral component of membrane cell protein disulfide isomerase activity transmembrane transporter activity cell redox homeostasis | details |
| TreatCFM001317 | serine-type carboxypeptidase activity proteolysis | details |
| TreatCFM001318 | Transcriptional misregulation in cancers mitotic cell cycle checkpoint | details |
| TreatCFM001374 | serine family amino acid biosynthetic process formate catabolic process phosphoglycerate dehydrogenase activity formate dehydrogenase (NAD+) activity hydrogen peroxide catabolic process response to oxidative stress cellular oxidant detoxification oxidation-reduction process peroxidase activity heterocyclic compound binding organic cyclic compound binding NAD binding | details |
| TreatCFM001598 | details |
Expression profiles
 Show details about module gene expression profiling |