TreatCFM000514's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| structural molecule activity | 0.006814349 | GO:0005198 |
| phosphatidylinositol binding | 0.006814349 | GO:0035091 |
| membrane coat | 0.006820998 | GO:0030117 |
| vesicle-mediated transport | 0.043550431 | GO:0016192 |
| signal transduction | 0.043550431 | GO:0007165 |
| intracellular protein transport | 0.043550431 | GO:0006886 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003583 | AT1G17100 (6.00E-69) | HBP1|haem-binding protein 1 |
| CRO_T003743 | AT2G29700 (7.00E-63) | ATPH1|pleckstrin homologue 1 |
| CRO_T015583 | - | - |
| CRO_T016323 | AT2G02410 (2.00E-95) | unknown protein |
| CRO_T019835 | - | - |
| CRO_T020935 | AT2G19950 (1.00E-158) | GC1|golgin candidate 1 |
| CRO_T022416 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001121 | regulation of photomorphogenesis COPI vesicle coat Transcription_related, Transcription factor: FAR1 Ubiquitin_Proteasome_system, E2: UBC mRNA surveillance pathway Ubiquitin mediated proteolysis phosphatidylinositol binding structural molecule activity vesicle-mediated transport signal transduction intracellular protein transport | details |
| TreatCFM001267 | signal transduction cytosolic large ribosomal subunit Ribosome translation maturation of LSU-rRNA transmembrane receptor protein tyrosine kinase activity RNA binding Protein_kinases_phosphatases, PPC:1.12.2: Leucine Rich Repeat Kinase II & X peptidyl-tyrosine phosphorylation phosphatidylinositol binding Transcription_related, Transcription factor: FAR1 | details |
| TreatCFM001712 | Ubiquitin_Proteasome_system, E2: UBC phosphatidylinositol binding Protein processing in endoplasmic reticulum ubiquitin-dependent protein catabolic process signal transduction protein ubiquitination | details |
| TreatCFM001845 | polyubiquitin binding alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity Ubiquitin_Proteasome_system, E2: UBC hydrogen peroxide biosynthetic process galactolipid biosynthetic process N-Glycan biosynthesis membrane coat mitochondrial outer membrane protein complex response to cadmium ion structural molecule activity protein glycosylation | details |
| TreatCFM001977 | MAPK signaling pathway spliceosomal complex assembly U5 snRNP U4/U6 x U5 tri-snRNP complex spliceosomal complex protein dephosphorylation phosphoprotein phosphatase activity | details |
Expression profiles
 Show details about module gene expression profiling |