TreatCFM001845's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| polyubiquitin binding | 0.004560901 | GO:0031593 |
| alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity | 0.004560901 | GO:0003827 |
| Ubiquitin_Proteasome_system, E2: UBC | 0.008452065 | ubs family |
| hydrogen peroxide biosynthetic process | 0.008993943 | GO:0050665 |
| galactolipid biosynthetic process | 0.008993943 | GO:0019375 |
| N-Glycan biosynthesis | 0.010709246 | KEGG pathway |
| membrane coat | 0.013755678 | GO:0030117 |
| mitochondrial outer membrane | 0.013755678 | GO:0005741 |
| protein complex | 0.013755678 | GO:0043234 |
| response to cadmium ion | 0.016478664 | GO:0046686 |
| structural molecule activity | 0.018219356 | GO:0005198 |
| protein glycosylation | 0.035886577 | GO:0006486 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004286 | AT5G12290 (3.00E-63) | DGS1|DGD1 SUPPRESSOR 1 |
| CRO_T010070 | AT2G46030 (5.00E-23) | UBC6|ubiquitin-conjugating enzyme 6 |
| CRO_T012354 | AT5G64160 (1.00E-04) | unknown protein |
| CRO_T018397 | AT1G16840 (1.00E-12) | unknown protein |
| CRO_T019835 | - | - |
| CRO_T021932 | AT3G13235 (4.00E-28) | DDI1|DNA-damage inducible 1 |
| CRO_T024670 | AT4G38240 (2.00E-09) | CGL|COMPLEX GLYCAN LESS; CGL1|COMPLEX GLYCAN LESS 1; GNTI|N-ACETYLGLUCOSAMINYLTRANSFERASE I |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000094 | Transcription_related, Transcription regulator: MED6 D-myo-inositol (1,4,5)-trisphosphate degradation ethylene biosynthesis I (plants) L-methionine salvage cycle II (plants) | details |
| TreatCFM000170 | pyruvate fermentation to ethanol II ribonuclease inhibitor activity oxaloacetate decarboxylase activity 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity carboxy-lyase activity RNA methyltransferase activity thiamine pyrophosphate binding | details |
| TreatCFM000359 | Cytochrome_P450, Cytochrome P450: CYP71B | details |
| TreatCFM000514 | structural molecule activity phosphatidylinositol binding membrane coat vesicle-mediated transport signal transduction intracellular protein transport | details |
| TreatCFM000559 | details | |
| TreatCFM000789 | Taurine and hypotaurine metabolism Golgi stack anaerobic respiration Golgi to plasma membrane protein transport Golgi vesicle docking detection of hypoxia peptidyl-cysteine oxidation Autophagy - yeast intra-Golgi vesicle-mediated transport SNARE complex vesicle fusion exocytosis nucleic acid phosphodiester bond hydrolysis oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen SNAP receptor activity SNARE binding endonuclease activity ATPase activity | details |
| TreatCFM001668 | helicase activity nucleic acid binding exocytosis vesicle fusion nucleic acid phosphodiester bond hydrolysis endonuclease activity SNARE binding SNAP receptor activity SNARE complex Spliceosome | details |
| TreatCFM001712 | Ubiquitin_Proteasome_system, E2: UBC phosphatidylinositol binding Protein processing in endoplasmic reticulum ubiquitin-dependent protein catabolic process signal transduction protein ubiquitination | details |
Expression profiles
 Show details about module gene expression profiling |