TreatCFM000552's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Cytochrome_P450, Cytochrome P450: CYP85A | 0.011076976 | CYP450 family |
| ribonuclease H2 complex | 0.011726644 | GO:0032299 |
| lipid transporter activity | 0.019228994 | GO:0005319 |
| N-acylphosphatidylethanolamine-specific phospholipase D activity | 0.019228994 | GO:0070290 |
| RNA-DNA hybrid ribonuclease activity | 0.019228994 | GO:0004523 |
| myo-inositol:proton symporter activity | 0.019228994 | GO:0005366 |
| phospholipase D activity | 0.019773719 | GO:0004630 |
| choline biosynthesis III | 0.020380946 | plantCyc |
| phosphatidate metabolism, as a signaling molecule | 0.020380946 | plantCyc |
| phospholipases | 0.020380946 | plantCyc |
| RNA catabolic process | 0.029297861 | GO:0006401 |
| phosphatidylcholine metabolic process | 0.029297861 | GO:0046470 |
| myo-inositol transport | 0.029297861 | GO:0015798 |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.029416683 | cazy family |
| Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | 0.029416683 | kinase family |
| Brassinosteroid biosynthesis | 0.030829201 | KEGG pathway |
| DNA replication | 0.030829201 | KEGG pathway |
| Glycerophospholipid metabolism | 0.030829201 | KEGG pathway |
| Lysosome | 0.030829201 | KEGG pathway |
| sterol metabolic process | 0.040511711 | GO:0016125 |
| glucose import | 0.040511711 | GO:0046323 |
| glucose transmembrane transport | 0.040511711 | GO:1904659 |
| brassinosteroid homeostasis | 0.040511711 | GO:0010268 |
| brassinosteroid biosynthetic process | 0.040511711 | GO:0016132 |
| lipid catabolic process | 0.040511711 | GO:0016042 |
| lipid transport | 0.040511711 | GO:0006869 |
| proton transport | 0.04573854 | GO:0015992 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001224 | AT5G03990 (1.00E-21) | unknown protein |
| CRO_T008173 | - | - |
| CRO_T008562 | AT1G42470 (0) | Patched family protein |
| CRO_T008770 | - | - |
| CRO_T016184 | AT1G30220 (0) | ATINT2|INOSITOL TRANSPORTER 2 |
| CRO_T023679 | AT4G19230 (3.00E-63) | CYP707A1|cytochrome P450, family 707, subfamily A, polypeptide 1 |
| CRO_T024959 | AT5G66780 (1.00E-08) | unknown protein |
| CRO_T027503 | - | - |
| CRO_T027914 | AT2G39440 (1.00E-47) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000051 | phosphatidylethanolamine biosynthesis II ethanolamine-phosphate cytidylyltransferase activity lipid transporter activity ErbB signaling pathway Lysosome Glycerophospholipid metabolism adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase | details |
| TreatCFM000095 | defense response, incompatible interaction activation of MAPK activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport MAP kinase kinase activity lipid transporter activity Base excision repair Lysosome MAPK cascade MAP kinase activity | details |
| TreatCFM000115 | phosphatidylethanolamine biosynthesis II | details |
| TreatCFM000272 | xyloglucan biosynthetic process endomembrane system organization cellular response to gravity fucose biosynthetic process | details |
| TreatCFM000278 | cellular component organization Homologous recombination single-organism cellular process lipid transporter activity MAP kinase kinase activity activation of MAPK activity defense response, incompatible interaction Protein_kinases_phosphatases, PPC:4.1.4: MAP2K cellular response to DNA damage stimulus MAP kinase activity lipid transport Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK cascade DNA metabolic process MAPK signaling pathway - plant DNA repair | details |
| TreatCFM000280 | defense response, incompatible interaction activation of MAPK activity lipid transporter activity MAP kinase kinase activity MAP kinase activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport MAPK cascade Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK signaling pathway - plant | details |
| TreatCFM000287 | phosphatidylinositol-3-phosphate binding phosphatidylinositol-3,5-bisphosphate binding autophagic cell death nucleophagy leaf senescence myo-inositol transport mitophagy protein localization to pre-autophagosomal structure protein lipidation pre-autophagosomal structure membrane myo-inositol:proton symporter activity response to starvation extrinsic component of membrane glucose transmembrane transport Transcription_related, Transcription factor: Trihelix glucose import response to water deprivation Spliceosome Transcription_related, Transcription factor: ERF Transcription_related, Transcription factor: M-type proton transport sugar:proton symporter activity glucose transmembrane transporter activity | details |
| TreatCFM000319 | endomembrane system organization fucose biosynthetic process defense response, incompatible interaction activation of MAPK activity xyloglucan biosynthetic process lipid transporter activity MAP kinase kinase activity MAP kinase activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport salicylic acid mediated signaling pathway aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis unidimensional cell growth MAPK cascade adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM000351 | lipid transporter activity lipid transport Lysosome | details |
| TreatCFM000380 | sulfotransferase activity lipid transporter activity lipid transport Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM000381 | 9-cis-epoxycarotenoid dioxygenase activity lipid transporter activity protein N-glycosylation (eukaryotic, high mannose) formation of glycosidic bonds, GlycosylTransferases: GTnc lipid transport | details |
| TreatCFM000400 | lipid transporter activity lipid transport Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Transcription_related, Transcription factor: B3 | details |
| TreatCFM000447 | activation of MAPK activity defense response, incompatible interaction MAP kinase kinase activity lipid transporter activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport MAP kinase activity MAPK cascade Lysosome Sesquiterpenoid and triterpenoid biosynthesis isomerase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK signaling pathway - plant | details |
| TreatCFM000474 | defense response, incompatible interaction activation of MAPK activity lipid transporter activity structural constituent of cell wall MAP kinase kinase activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K MAP kinase activity lipid transport MAPK cascade Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK signaling pathway - plant | details |
| TreatCFM000551 | phospholipase D activity N-acylphosphatidylethanolamine-specific phospholipase D activity lipid transporter activity phosphatidylcholine metabolic process lipid catabolic process lipid transport choline biosynthesis III phosphatidate metabolism, as a signaling molecule phospholipases Glycerophospholipid metabolism Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM000562 | phosphatidylethanolamine biosynthesis II ethanolamine-phosphate cytidylyltransferase activity lipid transporter activity Glycerophospholipid metabolism Lysosome lipid transport integral component of mitochondrial outer membrane adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII biosynthetic process serine-type endopeptidase activity | details |
| TreatCFM000647 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K MAP kinase kinase activity lipid transporter activity activation of MAPK activity defense response, incompatible interaction MAP kinase activity embryo sac development lipid transport mRNA processing Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK cascade rRNA processing MAPK signaling pathway - plant RNA processing | details |
| TreatCFM000773 | defense response, incompatible interaction activation of MAPK activity lipid transporter activity MAP kinase kinase activity MAP kinase activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport MAPK cascade Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK signaling pathway - plant | details |
| TreatCFM000875 | fucose biosynthetic process endomembrane system organization xyloglucan biosynthetic process Lysosome lipid transporter activity lipid transport salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII integral component of Golgi membrane | details |
| TreatCFM000886 | activation of MAPK activity defense response, incompatible interaction MAP kinase kinase activity lipid transporter activity MAP kinase activity lipid transport Protein_kinases_phosphatases, PPC:4.1.4: MAP2K MAPK cascade Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Transcription_related, Transcription factor: B3 MAPK signaling pathway - plant | details |
| TreatCFM000943 | lipid transporter activity lipid transport Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM000958 | lipid transporter activity lipid transport Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM000962 | lipid transporter activity lipid transport Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Transcription_related, Transcription factor: B3 | details |
| TreatCFM000976 | defense response, incompatible interaction activation of MAPK activity lipid transporter activity MAP kinase kinase activity MAP kinase activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport MAPK cascade Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK signaling pathway - plant | details |
| TreatCFM001128 | Transcription_related, Transcription factor: C3H Ubiquitin mediated proteolysis | details |
| TreatCFM001224 | lipid transporter activity Lysosome lipid transport adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII peptidase activity aspartic-type endopeptidase activity lipid metabolic process | details |
| TreatCFM001301 | Cytochrome_P450, Cytochrome P450: CYP85A Protein_kinases_phosphatases, PPC:4.5.6: LAMMER Kinase Family ribonuclease H2 complex fatty acid elongation -- saturated L-histidine biosynthesis L-leucine degradation I PRPP biosynthesis I L-valine degradation I octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) lipid homeostasis leucine catabolic process nucleoside metabolic process nucleotide biosynthetic process histidine biosynthetic process sodium ion transport RNA catabolic process branched-chain amino acid catabolic process fatty acid beta-oxidation using acyl-CoA dehydrogenase isovaleryl-CoA dehydrogenase activity histidinol dehydrogenase activity Valine, leucine and isoleucine degradation Brassinosteroid biosynthesis RNA-DNA hybrid ribonuclease activity ribose phosphate diphosphokinase activity | details |
| TreatCFM001491 | lipid transporter activity plasmodesma Hedgehog signaling pathway lipid transport Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Ubiquitin_Proteasome_system, E3 adaptor: BTB transporter activity | details |
| TreatCFM001493 | activation of MAPK activity defense response, incompatible interaction fucose biosynthetic process xyloglucan biosynthetic process endomembrane system organization Ribosome MAP kinase kinase activity lipid transporter activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K structural constituent of ribosome 5S rRNA binding MAP kinase activity translation lipid transport salicylic acid mediated signaling pathway unidimensional cell growth adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII integral component of Golgi membrane MAPK cascade aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) detoxification of reactive carbonyls in chloroplasts Flavonoid biosynthesis flavonoid biosynthesis (in equisetum) leucodelphinidin biosynthesis NAD/NADH phosphorylation and dephosphorylation pinobanksin biosynthesis xyloglucan biosynthesis Lysosome single-organism metabolic process | details |
| TreatCFM001562 | lipid transporter activity Ether lipid metabolism lipid transport Transcriptional misregulation in cancers Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM001790 | lipid transport Lysosome lipid transporter activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Transcription_related, Transcription factor: NAC | details |
Expression profiles
 Show details about module gene expression profiling |