TreatCFM000562's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| phosphatidylethanolamine biosynthesis II | 0.002656903 | plantCyc |
| ethanolamine-phosphate cytidylyltransferase activity | 0.002925359 | GO:0004306 |
| lipid transporter activity | 0.003655402 | GO:0005319 |
| Glycerophospholipid metabolism | 0.022197025 | KEGG pathway |
| Lysosome | 0.022197025 | KEGG pathway |
| lipid transport | 0.023364176 | GO:0006869 |
| integral component of mitochondrial outer membrane | 0.024272122 | GO:0031307 |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.029122516 | cazy family |
| Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | 0.029122516 | kinase family |
| biosynthetic process | 0.032743486 | GO:0009058 |
| serine-type endopeptidase activity | 0.046288966 | GO:0004252 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004302 | - | - |
| CRO_T006359 | - | - |
| CRO_T008562 | AT1G42470 (0) | Patched family protein |
| CRO_T014727 | AT5G59100 (5.00E-153) | Subtilisin-like serine endopeptidase family protein |
| CRO_T019621 | - | - |
| CRO_T023626 | - | - |
| CRO_T024127 | AT2G38670 (8.00E-179) | PECT1|phosphorylethanolamine cytidylyltransferase 1 |
| CRO_T028719 | - | - |
| CRO_T029349 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000003 | details | |
| TreatCFM000051 | phosphatidylethanolamine biosynthesis II ethanolamine-phosphate cytidylyltransferase activity lipid transporter activity ErbB signaling pathway Lysosome Glycerophospholipid metabolism adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase | details |
| TreatCFM000091 | ethanolamine-phosphate cytidylyltransferase activity integral component of mitochondrial outer membrane phosphatidylethanolamine biosynthesis II biosynthetic process Glycerophospholipid metabolism | details |
| TreatCFM000095 | defense response, incompatible interaction activation of MAPK activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport MAP kinase kinase activity lipid transporter activity Base excision repair Lysosome MAPK cascade MAP kinase activity | details |
| TreatCFM000104 | integral component of mitochondrial outer membrane nucleolar ribonuclease P complex auxin catabolic process | details |
| TreatCFM000115 | phosphatidylethanolamine biosynthesis II | details |
| TreatCFM000141 | ethanolamine-phosphate cytidylyltransferase activity integral component of mitochondrial outer membrane phosphatidylethanolamine biosynthesis II biosynthetic process Glycerophospholipid metabolism | details |
| TreatCFM000181 | ethanolamine-phosphate cytidylyltransferase activity endomembrane system organization xyloglucan biosynthetic process fucose biosynthetic process integral component of Golgi membrane integral component of mitochondrial outer membrane salicylic acid mediated signaling pathway unidimensional cell growth phosphatidylethanolamine biosynthesis II xyloglucan biosynthesis aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation biosynthetic process transferase activity, transferring glycosyl groups Lysine degradation Glycerophospholipid metabolism formation of glycosidic bonds, GlycosylTransferases: GTnc Ubiquitin_Proteasome_system, E3 adaptor: BTB Ubiquitin_Proteasome_system, E3 adaptor: SKP1 | details |
| TreatCFM000223 | ethanolamine-phosphate cytidylyltransferase activity integral component of mitochondrial outer membrane phosphatidylethanolamine biosynthesis II biosynthetic process Ubiquitin_Proteasome_system, E3 adaptor: BTB Ubiquitin_Proteasome_system, E3 adaptor: SKP1 Lysine degradation Glycerophospholipid metabolism | details |
| TreatCFM000224 | ethanolamine-phosphate cytidylyltransferase activity integral component of mitochondrial outer membrane phosphatidylethanolamine biosynthesis II biosynthetic process Glycerophospholipid metabolism | details |
| TreatCFM000272 | xyloglucan biosynthetic process endomembrane system organization cellular response to gravity fucose biosynthetic process | details |
| TreatCFM000278 | cellular component organization Homologous recombination single-organism cellular process lipid transporter activity MAP kinase kinase activity activation of MAPK activity defense response, incompatible interaction Protein_kinases_phosphatases, PPC:4.1.4: MAP2K cellular response to DNA damage stimulus MAP kinase activity lipid transport Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK cascade DNA metabolic process MAPK signaling pathway - plant DNA repair | details |
| TreatCFM000280 | defense response, incompatible interaction activation of MAPK activity lipid transporter activity MAP kinase kinase activity MAP kinase activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport MAPK cascade Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK signaling pathway - plant | details |
| TreatCFM000319 | endomembrane system organization fucose biosynthetic process defense response, incompatible interaction activation of MAPK activity xyloglucan biosynthetic process lipid transporter activity MAP kinase kinase activity MAP kinase activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport salicylic acid mediated signaling pathway aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis unidimensional cell growth MAPK cascade adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM000330 | ethanolamine-phosphate cytidylyltransferase activity phosphatidylethanolamine biosynthesis II integral component of mitochondrial outer membrane Glycerophospholipid metabolism biosynthetic process serine-type endopeptidase activity cell wall | details |
| TreatCFM000351 | lipid transporter activity lipid transport Lysosome | details |
| TreatCFM000380 | sulfotransferase activity lipid transporter activity lipid transport Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM000381 | 9-cis-epoxycarotenoid dioxygenase activity lipid transporter activity protein N-glycosylation (eukaryotic, high mannose) formation of glycosidic bonds, GlycosylTransferases: GTnc lipid transport | details |
| TreatCFM000400 | lipid transporter activity lipid transport Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Transcription_related, Transcription factor: B3 | details |
| TreatCFM000447 | activation of MAPK activity defense response, incompatible interaction MAP kinase kinase activity lipid transporter activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport MAP kinase activity MAPK cascade Lysosome Sesquiterpenoid and triterpenoid biosynthesis isomerase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK signaling pathway - plant | details |
| TreatCFM000462 | phosphatidylethanolamine biosynthesis II Cytochrome_P450, Cytochrome P450: CYP71B ethanolamine-phosphate cytidylyltransferase activity integral component of mitochondrial outer membrane Glycerophospholipid metabolism biosynthetic process | details |
| TreatCFM000474 | defense response, incompatible interaction activation of MAPK activity lipid transporter activity structural constituent of cell wall MAP kinase kinase activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K MAP kinase activity lipid transport MAPK cascade Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK signaling pathway - plant | details |
| TreatCFM000551 | phospholipase D activity N-acylphosphatidylethanolamine-specific phospholipase D activity lipid transporter activity phosphatidylcholine metabolic process lipid catabolic process lipid transport choline biosynthesis III phosphatidate metabolism, as a signaling molecule phospholipases Glycerophospholipid metabolism Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM000552 | Cytochrome_P450, Cytochrome P450: CYP85A ribonuclease H2 complex lipid transporter activity N-acylphosphatidylethanolamine-specific phospholipase D activity RNA-DNA hybrid ribonuclease activity myo-inositol:proton symporter activity phospholipase D activity choline biosynthesis III phosphatidate metabolism, as a signaling molecule phospholipases RNA catabolic process phosphatidylcholine metabolic process myo-inositol transport adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Brassinosteroid biosynthesis DNA replication Glycerophospholipid metabolism Lysosome sterol metabolic process glucose import glucose transmembrane transport brassinosteroid homeostasis brassinosteroid biosynthetic process lipid catabolic process lipid transport proton transport | details |
| TreatCFM000618 | dUDP biosynthetic process dTDP biosynthetic process dTTP biosynthetic process thymidylate kinase activity ethanolamine-phosphate cytidylyltransferase activity | details |
| TreatCFM000647 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K MAP kinase kinase activity lipid transporter activity activation of MAPK activity defense response, incompatible interaction MAP kinase activity embryo sac development lipid transport mRNA processing Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK cascade rRNA processing MAPK signaling pathway - plant RNA processing | details |
| TreatCFM000712 | ethanolamine-phosphate cytidylyltransferase activity integral component of mitochondrial outer membrane phosphatidylethanolamine biosynthesis II biosynthetic process Glycerophospholipid metabolism | details |
| TreatCFM000773 | defense response, incompatible interaction activation of MAPK activity lipid transporter activity MAP kinase kinase activity MAP kinase activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport MAPK cascade Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK signaling pathway - plant | details |
| TreatCFM000778 | ethanolamine-phosphate cytidylyltransferase activity phosphatidylethanolamine biosynthesis II integral component of mitochondrial outer membrane Glycerophospholipid metabolism biosynthetic process serine-type endopeptidase activity cell wall | details |
| TreatCFM000875 | fucose biosynthetic process endomembrane system organization xyloglucan biosynthetic process Lysosome lipid transporter activity lipid transport salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII integral component of Golgi membrane | details |
| TreatCFM000886 | activation of MAPK activity defense response, incompatible interaction MAP kinase kinase activity lipid transporter activity MAP kinase activity lipid transport Protein_kinases_phosphatases, PPC:4.1.4: MAP2K MAPK cascade Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Transcription_related, Transcription factor: B3 MAPK signaling pathway - plant | details |
| TreatCFM000891 | xyloglucan biosynthetic process endomembrane system organization fucose biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth transferase activity, transferring glycosyl groups aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis | details |
| TreatCFM000900 | Glycerophospholipid metabolism ethanolamine-phosphate cytidylyltransferase activity integral component of mitochondrial outer membrane phosphatidylethanolamine biosynthesis II biosynthetic process | details |
| TreatCFM000911 | ethanolamine-phosphate cytidylyltransferase activity xyloglucan biosynthetic process endomembrane system organization fucose biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc integral component of mitochondrial outer membrane integral component of Golgi membrane Glycerophospholipid metabolism salicylic acid mediated signaling pathway unidimensional cell growth phosphatidylethanolamine biosynthesis II xyloglucan biosynthesis aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation biosynthetic process transferase activity, transferring glycosyl groups | details |
| TreatCFM000943 | lipid transporter activity lipid transport Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM000958 | lipid transporter activity lipid transport Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM000959 | ethanolamine-phosphate cytidylyltransferase activity phosphatidylethanolamine biosynthesis II integral component of mitochondrial outer membrane Glycerophospholipid metabolism biosynthetic process serine-type endopeptidase activity | details |
| TreatCFM000962 | lipid transporter activity lipid transport Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Transcription_related, Transcription factor: B3 | details |
| TreatCFM000976 | defense response, incompatible interaction activation of MAPK activity lipid transporter activity MAP kinase kinase activity MAP kinase activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K lipid transport MAPK cascade Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII MAPK signaling pathway - plant | details |
| TreatCFM000980 | proteasome complex RNA-dependent DNA biosynthetic process RNA-directed DNA polymerase activity Ubiquitin_Proteasome_system, DUB: JAMM Proteasome DNA integration DNA recombination Transcription_related, Transcription factor: bHLH proteasome-mediated ubiquitin-dependent protein catabolic process | details |
| TreatCFM001224 | lipid transporter activity Lysosome lipid transport adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII peptidase activity aspartic-type endopeptidase activity lipid metabolic process | details |
| TreatCFM001272 | phosphatidylethanolamine biosynthesis II ethanolamine-phosphate cytidylyltransferase activity peptide metabolic process Noc complex integral component of mitochondrial outer membrane nuclear lumen | details |
| TreatCFM001491 | lipid transporter activity plasmodesma Hedgehog signaling pathway lipid transport Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Ubiquitin_Proteasome_system, E3 adaptor: BTB transporter activity | details |
| TreatCFM001493 | activation of MAPK activity defense response, incompatible interaction fucose biosynthetic process xyloglucan biosynthetic process endomembrane system organization Ribosome MAP kinase kinase activity lipid transporter activity Protein_kinases_phosphatases, PPC:4.1.4: MAP2K structural constituent of ribosome 5S rRNA binding MAP kinase activity translation lipid transport salicylic acid mediated signaling pathway unidimensional cell growth adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII integral component of Golgi membrane MAPK cascade aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) detoxification of reactive carbonyls in chloroplasts Flavonoid biosynthesis flavonoid biosynthesis (in equisetum) leucodelphinidin biosynthesis NAD/NADH phosphorylation and dephosphorylation pinobanksin biosynthesis xyloglucan biosynthesis Lysosome single-organism metabolic process | details |
| TreatCFM001562 | lipid transporter activity Ether lipid metabolism lipid transport Transcriptional misregulation in cancers Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM001790 | lipid transport Lysosome lipid transporter activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Transcription_related, Transcription factor: NAC | details |
Expression profiles
 Show details about module gene expression profiling |