TreatCFM001235's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: BBR-BPC | 0.006819386 | TF family |
| Transcription_related, Transcription factor: GRF | 0.006819386 | TF family |
| baicalein degradation (hydrogen peroxide detoxification) | 0.009561745 | plantCyc |
| 2-oxoisovalerate decarboxylation to isobutanoyl-CoA | 0.010605191 | plantCyc |
| Propanoate metabolism | 0.010622435 | KEGG pathway |
| oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | 0.032158986 | GO:0016624 |
| Transcription_related, Transcription factor: HB | 0.048175207 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002126 | AT1G03080 (2.00E-11) | NET1D|Networked 1D |
| CRO_T009374 | AT5G21090 (6.00E-17) | Leucine-rich repeat (LRR) family protein |
| CRO_T010334 | AT1G68120 (6.00E-33) | BPC3|basic pentacysteine 3 |
| CRO_T012080 | AT3G05220 (2.00E-21) | Heavy metal transport/detoxification superfamily protein |
| CRO_T012531 | AT2G22840 (6.00E-30) | AtGRF1|growth-regulating factor 1 |
| CRO_T013859 | AT2G24800 (2.00E-103) | Peroxidase superfamily protein |
| CRO_T014216 | AT1G17920 (0) | HDG12|homeodomain GLABROUS 12 |
| CRO_T015224 | - | - |
| CRO_T019250 | AT1G21400 (2.00E-113) | Thiamin diphosphate-binding fold (THDP-binding) superfamily protein |
| CRO_T021676 | AT2G42840 (6.00E-23) | PDF1|protodermal factor 1 |
| CRO_T023748 | AT5G12890 (3.00E-38) | UDP-Glycosyltransferase superfamily protein |
| CRO_T024160 | AT3G18050 (4.00E-77) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000838 | Cytochrome_P450, Cytochrome P450: CYP77B L-carnitine biosynthesis vernolate biosynthesis I Transcription_related, Transcription factor: GRF Transcription_related, Transcription factor: SBP poly-hydroxy fatty acids biosynthesis long-chain-alcohol O-fatty-acyltransferase activity diacylglycerol O-acyltransferase activity triglyceride biosynthetic process diacylglycerol and triacylglycerol biosynthesis integral component of membrane plasma membrane secondary metabolite biosynthetic process response to stress | details |
| TreatCFM001138 | formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: BBR-BPC mevalonate pathway I calcium:sodium antiporter activity signaling receptor activity acetyl-CoA C-acetyltransferase activity protein histidine kinase activity calcium ion homeostasis sodium ion transmembrane transport phosphorelay signal transduction system membrane part | details |
| TreatCFM001236 | integral component of membrane tau-protein kinase activity Protein_kinases_phosphatases, PPC:1.12.3: Leucine Rich Repeat Kinase VII glucan endo-1,3-beta-D-glucosidase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | details |
| TreatCFM001281 | Transcription_related, Transcription factor: BBR-BPC pyrimidine nucleotide metabolic process dCMP deaminase activity polysaccharide biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc homogalacturonan biosynthesis Phenylpropanoid biosynthesis plant-type cell wall organization | details |
| TreatCFM001345 | Propanoate metabolism phosphatidylinositol-3-phosphate binding phosphatidylinositol-3,5-bisphosphate binding oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor nucleophagy protein localization to pre-autophagosomal structure mitophagy protein lipidation 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Transcription_related, Transcription factor: GRF formation of glycosidic bonds, GlycosylTransferases: GTnc pre-autophagosomal structure membrane extrinsic component of membrane | details |
| TreatCFM001503 | retrograde protein transport, ER to cytosol Transcription_related, Transcription factor: GRF endoplasmic reticulum lumen ER-associated ubiquitin-dependent protein catabolic process formation of glycosidic bonds, GlycosylTransferases: GTnc response to salt stress lipid binding Transcription_related, Transcription factor: HB Protein processing in endoplasmic reticulum sequence-specific DNA binding | details |
| TreatCFM002062 | Transcription_related, Transcription factor: BBR-BPC | details |
Expression profiles
 Show details about module gene expression profiling |