TreatCFM001503's detailed annotation
Protein:
Yellow color--query protein
Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein
Blue--proteins own interaction and negative co-expression relationship with target protein
Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
retrograde protein transport, ER to cytosol0.002955301GO:0030970
Transcription_related, Transcription factor: GRF0.006824224TF family
endoplasmic reticulum lumen0.00974673GO:0005788
ER-associated ubiquitin-dependent protein catabolic process0.014020058GO:0030433
formation of glycosidic bonds, GlycosylTransferases: GTnc0.0194503cazy family
response to salt stress0.022094451GO:0009651
lipid binding0.022804843GO:0008289
Transcription_related, Transcription factor: HB0.024250095TF family
Protein processing in endoplasmic reticulum 0.037871877KEGG pathway
sequence-specific DNA binding0.046991536GO:0043565

Module member annotation

Gene IDOrtholog in Arabidopsis (Blast E-value)Annotation in Arabidopsis
CRO_T012531AT2G22840 (6.00E-30)AtGRF1|growth-regulating factor 1
CRO_T014216AT1G17920 (0)HDG12|homeodomain GLABROUS 12
CRO_T021976AT4G09060 (8.00E-77)unknown protein
CRO_T030246AT5G35080 (4.00E-97)OS9|OS9
CRO_T031738AT5G12460 (1.00E-110)Protein of unknown function (DUF604)
CRO_T032957--

Direct connection functional modules

Module IDFunction AnnotationOverlap condition
TreatCFM000838Cytochrome_P450, Cytochrome P450: CYP77B
L-carnitine biosynthesis
vernolate biosynthesis I
Transcription_related, Transcription factor: GRF
Transcription_related, Transcription factor: SBP
poly-hydroxy fatty acids biosynthesis
long-chain-alcohol O-fatty-acyltransferase activity
diacylglycerol O-acyltransferase activity
triglyceride biosynthetic process
diacylglycerol and triacylglycerol biosynthesis
integral component of membrane
plasma membrane
secondary metabolite biosynthetic process
response to stress
details
TreatCFM001064retrograde protein transport, ER to cytosol
endoplasmic reticulum lumen
monolayer-surrounded lipid storage body
lipid storage
sexual reproduction
ER-associated ubiquitin-dependent protein catabolic process
translation initiation factor activity
response to salt stress
translational initiation
Protein processing in endoplasmic reticulum
details
TreatCFM001065retrograde protein transport, ER to cytosol
2-oxoglutarate decarboxylation to succinyl-CoA
2-oxoisovalerate decarboxylation to isobutanoyl-CoA
glycine cleavage
pyruvate decarboxylation to acetyl CoA
dihydrolipoyl dehydrogenase activity
endoplasmic reticulum lumen
microtubule-severing ATPase activity
ATP-dependent peptidase activity
ER-associated ubiquitin-dependent protein catabolic process
metalloendopeptidase activity
response to salt stress
translational initiation
cell
cell redox homeostasis
translation initiation factor activity
details
TreatCFM001235Transcription_related, Transcription factor: BBR-BPC
Transcription_related, Transcription factor: GRF
baicalein degradation (hydrogen peroxide detoxification)
2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Propanoate metabolism
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Transcription_related, Transcription factor: HB
details
TreatCFM001286Transcription_related, Transcription factor: C2C2-GATA
Endocytosis
details
TreatCFM001345Propanoate metabolism
phosphatidylinositol-3-phosphate binding
phosphatidylinositol-3,5-bisphosphate binding
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
nucleophagy
protein localization to pre-autophagosomal structure
mitophagy
protein lipidation
2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Transcription_related, Transcription factor: GRF
formation of glycosidic bonds, GlycosylTransferases: GTnc
pre-autophagosomal structure membrane
extrinsic component of membrane
details

Expression profiles


Show details about module gene expression profiling
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