TreatCFM000960's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| flavin adenine dinucleotide binding | 0.003679314 | GO:0050660 |
| sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity | 0.004497769 | GO:0047012 |
| oxidation-reduction process | 0.005684669 | GO:0055114 |
| steroid biosynthetic process | 0.005684669 | GO:0006694 |
| plant sterol biosynthesis | 0.006396253 | plantCyc |
| L-gulonolactone oxidase activity | 0.007494288 | GO:0050105 |
| D-arabinono-1,4-lactone oxidase activity | 0.008989159 | GO:0003885 |
| 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 0.008989159 | GO:0003854 |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.018338884 | cazy family |
| Protein_kinases_phosphatases, PPC:1.3.1: Receptor-like protein kinase | 0.018338884 | kinase family |
| redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 | 0.018338884 | cazy family |
| oxidoreductase activity, acting on CH-OH group of donors | 0.029139757 | GO:0016614 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002397 | AT1G31130 (4.00E-47) | unknown protein |
| CRO_T005020 | AT3G51550 (3.00E-73) | FER|FERONIA |
| CRO_T015898 | AT1G32300 (0) | GulLO1|L -gulono-1,4-lactone ( L -GulL) oxidase 1 |
| CRO_T017941 | AT3G13980 (1.00E-41) | unknown protein |
| CRO_T023952 | AT2G34790 (1.00E-25) | EDA28|EMBRYO SAC DEVELOPMENT ARREST 28; MEE23|MATERNAL EFFECT EMBRYO ARREST 23 |
| CRO_T027095 | AT2G33630 (0) | NAD(P)-binding Rossmann-fold superfamily protein |
| CRO_T033318 | AT5G23100 (9.00E-76) | Protein of unknown function, DUF617 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000399 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Protein_kinases_phosphatases, PPC:2.1.2: Ankyrin Repeat Domain Kinase Nitrogen metabolism plant sterol biosynthesis sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity one-carbon metabolic process steroid biosynthetic process carbonate dehydratase activity 3-beta-hydroxy-delta5-steroid dehydrogenase activity endoplasmic reticulum | details |
| TreatCFM000546 | plant sterol biosynthesis Glycerolipid metabolism sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity 3-beta-hydroxy-delta5-steroid dehydrogenase activity transcription factor activity, transcription factor binding glycerol-3-phosphate 2-O-acyltransferase activity pollen sperm cell differentiation steroid biosynthetic process cutin biosynthetic process phosphatase activity Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII Transcription_related, Transcription factor: GRAS Ubiquitin_Proteasome_system, E3: U-box | details |
| TreatCFM001005 | sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity D-arabinono-1,4-lactone oxidase activity 3-beta-hydroxy-delta5-steroid dehydrogenase activity L-gulonolactone oxidase activity anthocyanidin modification (Arabidopsis) anthocyanin biosynthesis anthocyanin biosynthesis (delphinidin 3-O-glucoside) anthocyanin biosynthesis (pelargonidin 3-O-glucoside) brassinosteroids inactivation plant sterol biosynthesis quercetin glucoside biosynthesis (Allium) steroid biosynthetic process quercetin 3-O-glucosyltransferase activity quercetin 7-O-glucosyltransferase activity flavonoid glucuronidation oxidation-reduction process flavonoid biosynthetic process flavin adenine dinucleotide binding | details |
| TreatCFM001063 | plant sterol biosynthesis sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 3-beta-hydroxy-delta5-steroid dehydrogenase activity steroid biosynthetic process ribosomal large subunit assembly Protein processing in endoplasmic reticulum unfolded protein binding protein serine/threonine phosphatase activity response to stress | details |
| TreatCFM001077 | chromosome Cell cycle - yeast formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:4.1.5.1: WNK like kinase - with no lysine kinase plant sterol biosynthesis starch biosynthesis sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity DNA catabolic process, endonucleolytic steroid biosynthetic process chromosome organization Transcription_related, Transcription regulator: GNAT N-acetyltransferase activity 3-beta-hydroxy-delta5-steroid dehydrogenase activity cellular transition metal ion homeostasis iron-sulfur cluster binding metal ion transport | details |
| TreatCFM001187 | sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity ribose-5-phosphate isomerase activity chromosome organization steroid biosynthetic process pentose-phosphate shunt, non-oxidative branch Cell cycle - yeast 3-beta-hydroxy-delta5-steroid dehydrogenase activity cellulose catabolic process formation of glycosidic bonds, GlycosylTransferases: GTnc cellulase activity Calvin-Benson-Bassham cycle pentose phosphate pathway (non-oxidative branch) plant sterol biosynthesis Rubisco shunt starch biosynthesis adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc chromosome Transcription_related, Transcription factor: C2H2 carbohydrate binding | details |
| TreatCFM001672 | sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity Transcription_related, Transcription factor: Trihelix plant sterol biosynthesis steroid biosynthetic process 3-beta-hydroxy-delta5-steroid dehydrogenase activity Ribosome biogenesis in eukaryotes protein serine/threonine phosphatase activity protein dephosphorylation | details |
| TreatCFM001674 | Transcription_related, Transcription factor: Trihelix plant sterol biosynthesis sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 3-beta-hydroxy-delta5-steroid dehydrogenase activity steroid biosynthetic process ribosomal large subunit assembly Protein processing in endoplasmic reticulum unfolded protein binding protein serine/threonine phosphatase activity response to stress | details |
| TreatCFM001775 | Cytochrome_P450, Cytochrome P450: CYP716A Protein_kinases_phosphatases, PPC:1.16.1: Receptor Like Cytoplasmic Kinase II betulinate biosynthesis oleanolate biosynthesis ursolate biosynthesis MicroRNAs in cancer Transcription_related, Transcription factor: C2H2 D-arabinono-1,4-lactone oxidase activity L-gulonolactone oxidase activity ribonuclease III activity | details |
Expression profiles
 Show details about module gene expression profiling |