TreatCFM001674's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: Trihelix | 0.004955377 | TF family |
| plant sterol biosynthesis | 0.005485094 | plantCyc |
| sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity | 0.006436646 | GO:0047012 |
| maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.016082105 | GO:0000463 |
| 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 0.016082105 | GO:0003854 |
| steroid biosynthetic process | 0.016082105 | GO:0006694 |
| ribosomal large subunit assembly | 0.028911451 | GO:0000027 |
| Protein processing in endoplasmic reticulum | 0.037871877 | KEGG pathway |
| unfolded protein binding | 0.044078996 | GO:0051082 |
| protein serine/threonine phosphatase activity | 0.044078996 | GO:0004722 |
| response to stress | 0.04567512 | GO:0006950 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006453 | AT1G07630 (7.00E-31) | PLL5|pol-like 5 |
| CRO_T016677 | AT3G10030 (1.00E-16) | aspartate/glutamate/uridylate kinase family protein |
| CRO_T019941 | AT2G04030 (0) | AtHsp90.5|HEAT SHOCK PROTEIN 90.5; EMB1956|EMBRYO DEFECTIVE 1956; Hsp88.1|HEAT SHOCK PROTEIN 88.1 |
| CRO_T024830 | AT3G23620 (1.00E-109) | Ribosomal RNA processing Brix domain protein |
| CRO_T027095 | AT2G33630 (0) | NAD(P)-binding Rossmann-fold superfamily protein |
| CRO_T028630 | AT2G42040 (1.00E-17) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000399 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Protein_kinases_phosphatases, PPC:2.1.2: Ankyrin Repeat Domain Kinase Nitrogen metabolism plant sterol biosynthesis sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity one-carbon metabolic process steroid biosynthetic process carbonate dehydratase activity 3-beta-hydroxy-delta5-steroid dehydrogenase activity endoplasmic reticulum | details |
| TreatCFM000546 | plant sterol biosynthesis Glycerolipid metabolism sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity 3-beta-hydroxy-delta5-steroid dehydrogenase activity transcription factor activity, transcription factor binding glycerol-3-phosphate 2-O-acyltransferase activity pollen sperm cell differentiation steroid biosynthetic process cutin biosynthetic process phosphatase activity Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII Transcription_related, Transcription factor: GRAS Ubiquitin_Proteasome_system, E3: U-box | details |
| TreatCFM000800 | secondary active sulfate transmembrane transporter activity sulfate transmembrane transport sucrose synthase activity sucrose metabolic process formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: C2C2-Dof Ribosome biogenesis in eukaryotes Starch and sucrose metabolism | details |
| TreatCFM000960 | flavin adenine dinucleotide binding sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity oxidation-reduction process steroid biosynthetic process plant sterol biosynthesis L-gulonolactone oxidase activity D-arabinono-1,4-lactone oxidase activity 3-beta-hydroxy-delta5-steroid dehydrogenase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.3.1: Receptor-like protein kinase redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 oxidoreductase activity, acting on CH-OH group of donors | details |
| TreatCFM001005 | sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity D-arabinono-1,4-lactone oxidase activity 3-beta-hydroxy-delta5-steroid dehydrogenase activity L-gulonolactone oxidase activity anthocyanidin modification (Arabidopsis) anthocyanin biosynthesis anthocyanin biosynthesis (delphinidin 3-O-glucoside) anthocyanin biosynthesis (pelargonidin 3-O-glucoside) brassinosteroids inactivation plant sterol biosynthesis quercetin glucoside biosynthesis (Allium) steroid biosynthetic process quercetin 3-O-glucosyltransferase activity quercetin 7-O-glucosyltransferase activity flavonoid glucuronidation oxidation-reduction process flavonoid biosynthetic process flavin adenine dinucleotide binding | details |
| TreatCFM001063 | plant sterol biosynthesis sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 3-beta-hydroxy-delta5-steroid dehydrogenase activity steroid biosynthetic process ribosomal large subunit assembly Protein processing in endoplasmic reticulum unfolded protein binding protein serine/threonine phosphatase activity response to stress | details |
| TreatCFM001077 | chromosome Cell cycle - yeast formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:4.1.5.1: WNK like kinase - with no lysine kinase plant sterol biosynthesis starch biosynthesis sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity DNA catabolic process, endonucleolytic steroid biosynthetic process chromosome organization Transcription_related, Transcription regulator: GNAT N-acetyltransferase activity 3-beta-hydroxy-delta5-steroid dehydrogenase activity cellular transition metal ion homeostasis iron-sulfur cluster binding metal ion transport | details |
| TreatCFM001187 | sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity ribose-5-phosphate isomerase activity chromosome organization steroid biosynthetic process pentose-phosphate shunt, non-oxidative branch Cell cycle - yeast 3-beta-hydroxy-delta5-steroid dehydrogenase activity cellulose catabolic process formation of glycosidic bonds, GlycosylTransferases: GTnc cellulase activity Calvin-Benson-Bassham cycle pentose phosphate pathway (non-oxidative branch) plant sterol biosynthesis Rubisco shunt starch biosynthesis adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc chromosome Transcription_related, Transcription factor: C2H2 carbohydrate binding | details |
| TreatCFM001582 | non-hydrolytic cleavage of glycosidic bonds, Polysaccharide Lyases: PL4 Transcription_related, Transcription factor: Trihelix Ribosome biogenesis in eukaryotes protein dephosphorylation | details |
| TreatCFM001672 | sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity Transcription_related, Transcription factor: Trihelix plant sterol biosynthesis steroid biosynthetic process 3-beta-hydroxy-delta5-steroid dehydrogenase activity Ribosome biogenesis in eukaryotes protein serine/threonine phosphatase activity protein dephosphorylation | details |
| TreatCFM001673 | Starch and sucrose metabolism adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc trehalose-phosphatase activity | details |
| TreatCFM001964 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: C2C2-Dof maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) metal ion transport ribosomal large subunit assembly cellular transition metal ion homeostasis | details |
Expression profiles
 Show details about module gene expression profiling |