TreatCFM001123's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| vacuolar transport | 0.002126245 | GO:0007034 |
| Endocytosis | 0.017603897 | KEGG pathway |
| intracellular | 0.038901794 | GO:0005622 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002188 | - | - |
| CRO_T005118 | - | - |
| CRO_T010818 | - | - |
| CRO_T020572 | AT1G03950 (5.00E-76) | VPS2.3|vacuolar protein sorting-associated protein 2.3 |
| CRO_T023589 | - | - |
| CRO_T026091 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000182 | trans-zeatin biosynthesis | details |
| TreatCFM000281 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction endomembrane system organization xyloglucan biosynthetic process activation of MAPK activity fucose biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant transferase activity, transferring glycosyl groups | details |
| TreatCFM000340 | details | |
| TreatCFM000467 | vacuolar transport Endocytosis intracellular | details |
| TreatCFM000516 | intracellular fucose biosynthetic process xyloglucan biosynthetic process endomembrane system organization formation of glycosidic bonds, GlycosylTransferases: GTnc integral component of Golgi membrane | details |
| TreatCFM000538 | vacuolar transport Transcription_related, Transcription factor: NF-YC protein heterodimerization activity Antigen processing and presentation Endocytosis | details |
| TreatCFM000618 | dUDP biosynthetic process dTDP biosynthetic process dTTP biosynthetic process thymidylate kinase activity ethanolamine-phosphate cytidylyltransferase activity | details |
| TreatCFM000637 | Amyotrophic lateral sclerosis (ALS) mitochondrial outer membrane translocase complex protein import into mitochondrial matrix vacuolar transport NLS-bearing protein import into nucleus base-excision repair DNA N-glycosylase activity nucleoplasm nuclear pore Base excision repair Lysosome regulation of catalytic activity nuclear localization sequence binding protein channel activity cysteine-type endopeptidase activity protein transporter activity Endocytosis | details |
| TreatCFM000706 | vacuolar transport Endocytosis | details |
| TreatCFM000788 | vacuolar transport Endocytosis intracellular | details |
| TreatCFM000974 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity indole-3-acetyl-amide conjugate biosynthesis vacuolar transport MAP kinase kinase activity | details |
| TreatCFM001029 | vacuolar transport Endocytosis intracellular | details |
| TreatCFM001208 | vacuolar transport Protein_kinases_phosphatases, PPC:4.4.1: Unknown Function Kinase Endocytosis intracellular | details |
| TreatCFM001381 | vacuolar transport Arachidonic acid metabolism Fanconi anemia pathway Endocytosis | details |
| TreatCFM001555 | vacuolar transport Transcription_related, Transcription factor: HB intracellular | details |
Expression profiles
 Show details about module gene expression profiling |