TreatCFM001555's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| vacuolar transport | 0.006378735 | GO:0007034 |
| Transcription_related, Transcription factor: HB | 0.013227325 | TF family |
| intracellular | 0.038901794 | GO:0005622 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007629 | AT1G05230 (2.00E-172) | HDG2|homeodomain GLABROUS 2 |
| CRO_T012018 | - | - |
| CRO_T018043 | - | - |
| CRO_T018986 | AT1G32780 (4.00E-20) | GroES-like zinc-binding dehydrogenase family protein |
| CRO_T020572 | AT1G03950 (5.00E-76) | VPS2.3|vacuolar protein sorting-associated protein 2.3 |
| CRO_T021167 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000050 | details | |
| TreatCFM000182 | trans-zeatin biosynthesis | details |
| TreatCFM000340 | details | |
| TreatCFM000467 | vacuolar transport Endocytosis intracellular | details |
| TreatCFM000516 | intracellular fucose biosynthetic process xyloglucan biosynthetic process endomembrane system organization formation of glycosidic bonds, GlycosylTransferases: GTnc integral component of Golgi membrane | details |
| TreatCFM000538 | vacuolar transport Transcription_related, Transcription factor: NF-YC protein heterodimerization activity Antigen processing and presentation Endocytosis | details |
| TreatCFM000618 | dUDP biosynthetic process dTDP biosynthetic process dTTP biosynthetic process thymidylate kinase activity ethanolamine-phosphate cytidylyltransferase activity | details |
| TreatCFM000623 | details | |
| TreatCFM000637 | Amyotrophic lateral sclerosis (ALS) mitochondrial outer membrane translocase complex protein import into mitochondrial matrix vacuolar transport NLS-bearing protein import into nucleus base-excision repair DNA N-glycosylase activity nucleoplasm nuclear pore Base excision repair Lysosome regulation of catalytic activity nuclear localization sequence binding protein channel activity cysteine-type endopeptidase activity protein transporter activity Endocytosis | details |
| TreatCFM000706 | vacuolar transport Endocytosis | details |
| TreatCFM000788 | vacuolar transport Endocytosis intracellular | details |
| TreatCFM000872 | mitotic spindle assembly checkpoint Transcription_related, Transcription factor: bZIP Apelin signaling pathway Cell cycle | details |
| TreatCFM000974 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity indole-3-acetyl-amide conjugate biosynthesis vacuolar transport MAP kinase kinase activity | details |
| TreatCFM001029 | vacuolar transport Endocytosis intracellular | details |
| TreatCFM001123 | vacuolar transport Endocytosis intracellular | details |
| TreatCFM001208 | vacuolar transport Protein_kinases_phosphatases, PPC:4.4.1: Unknown Function Kinase Endocytosis intracellular | details |
| TreatCFM001271 | Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII response to biotic stimulus defense response | details |
| TreatCFM001381 | vacuolar transport Arachidonic acid metabolism Fanconi anemia pathway Endocytosis | details |
| TreatCFM001509 | cell wall macromolecule catabolic process chitin binding chitinase activity chitin catabolic process Amino sugar and nucleotide sugar metabolism carbohydrate metabolic process adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: GRAS | details |
| TreatCFM001510 | rosmarinic acid biosynthesis I Cytochrome_P450, Cytochrome P450: CYP78A Transcription_related, Transcription factor: GRAS secondary metabolite biosynthetic process | details |
| TreatCFM001557 | kinase activity | details |
Expression profiles
 Show details about module gene expression profiling |