TreatCFM001138's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.001063908 | cazy family |
| Transcription_related, Transcription factor: BBR-BPC | 0.001595391 | TF family |
| mevalonate pathway I | 0.002303262 | plantCyc |
| calcium:sodium antiporter activity | 0.003036347 | GO:0005432 |
| signaling receptor activity | 0.003036347 | GO:0038023 |
| acetyl-CoA C-acetyltransferase activity | 0.003373221 | GO:0003985 |
| protein histidine kinase activity | 0.004046968 | GO:0004673 |
| calcium ion homeostasis | 0.006072695 | GO:0055074 |
| sodium ion transmembrane transport | 0.012137316 | GO:0035725 |
| phosphorelay signal transduction system | 0.024231625 | GO:0000160 |
| membrane part | 0.033080171 | GO:0044425 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T010334 | AT1G68120 (6.00E-33) | BPC3|basic pentacysteine 3 |
| CRO_T012152 | AT2G33570 (4.00E-128) | GALS1|galactan synthase 1 |
| CRO_T012753 | AT1G18990 (1.00E-18) | Protein of unknown function, DUF593 |
| CRO_T016131 | AT5G47720 (4.00E-164) | AACT1|acetoacetyl-CoA thiolase 1 |
| CRO_T016455 | - | - |
| CRO_T028687 | AT1G53210 (5.00E-133) | NCL|Na+/Ca2+ exchanger |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000865 | xylulose metabolic process xylulokinase activity glycylpeptide N-tetradecanoyltransferase activity N-terminal peptidyl-glycine N-myristoylation acetyl-CoA C-acetyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc mevalonate pathway I protein N-glycosylation (eukaryotic, high mannose) Rho guanyl-nucleotide exchange factor activity carbohydrate phosphorylation positive regulation of GTPase activity transferase activity, transferring glycosyl groups N-Glycan biosynthesis Pentose and glucuronate interconversions | details |
| TreatCFM001139 | HAUS complex xylogalacturonan biosynthesis spindle assembly formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: C3H lipid metabolic process | details |
| TreatCFM001235 | Transcription_related, Transcription factor: BBR-BPC Transcription_related, Transcription factor: GRF baicalein degradation (hydrogen peroxide detoxification) 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Propanoate metabolism oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor Transcription_related, Transcription factor: HB | details |
| TreatCFM001281 | Transcription_related, Transcription factor: BBR-BPC pyrimidine nucleotide metabolic process dCMP deaminase activity polysaccharide biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc homogalacturonan biosynthesis Phenylpropanoid biosynthesis plant-type cell wall organization | details |
| TreatCFM001543 | formation of glycosidic bonds, GlycosylTransferases: GTnc glutathione peroxidase activity Arachidonic acid metabolism glutathione-peroxide redox reactions reactive oxygen species degradation aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation NADH dehydrogenase (ubiquinone) activity DNA replication intracellular part oxidation-reduction process response to oxidative stress cellular oxidant detoxification | details |
| TreatCFM001737 | phosphatidyltransferase activity diacylglycerol cholinephosphotransferase activity ethanolaminephosphotransferase activity signaling receptor activity calcium ion binding phosphatidylethanolamine biosynthetic process Golgi apparatus nuclear outer membrane-endoplasmic reticulum membrane network protein histidine kinase activity diacylglycerol biosynthesis (PUFA enrichment in oilseed) phosphatidylcholine biosynthesis I phosphatidylcholine biosynthesis II phosphatidylethanolamine biosynthesis II integral component of membrane choline biosynthesis III formation of glycosidic bonds, GlycosylTransferases: GTnc phosphorelay signal transduction system membrane part Glycerophospholipid metabolism MAPK signaling pathway - plant | details |
| TreatCFM002062 | Transcription_related, Transcription factor: BBR-BPC | details |
Expression profiles
 Show details about module gene expression profiling |