TreatCFM002062's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: BBR-BPC | 0.001063594 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001255 | - | - |
| CRO_T009659 | AT1G04650 (4.00E-21) | unknown protein |
| CRO_T010334 | AT1G68120 (6.00E-33) | BPC3|basic pentacysteine 3 |
| CRO_T023257 | AT3G18590 (2.00E-20) | ENODL5|early nodulin-like protein 5 |
| CRO_T024974 | AT3G22790 (0) | NET1A|Networked 1A |
| CRO_T033239 | AT3G52380 (6.00E-20) | CP33|chloroplast RNA-binding protein 33; PDE322|PIGMENT DEFECTIVE 322 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000667 | regulation of gene expression translational initiation RNA secondary structure unwinding mRNA surveillance pathway RNA transport | details |
| TreatCFM000687 | bisbenzylisoquinoline alkaloid biosynthesis magnoflorine biosynthesis nuclear outer membrane-endoplasmic reticulum membrane network AP-3 adaptor complex detoxification of copper ion copper ion export hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | details |
| TreatCFM001138 | formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: BBR-BPC mevalonate pathway I calcium:sodium antiporter activity signaling receptor activity acetyl-CoA C-acetyltransferase activity protein histidine kinase activity calcium ion homeostasis sodium ion transmembrane transport phosphorelay signal transduction system membrane part | details |
| TreatCFM001162 | Transcription_related, Transcription factor: MYB-related translational initiation RNA secondary structure unwinding regulation of gene expression RNA transport | details |
| TreatCFM001235 | Transcription_related, Transcription factor: BBR-BPC Transcription_related, Transcription factor: GRF baicalein degradation (hydrogen peroxide detoxification) 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Propanoate metabolism oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor Transcription_related, Transcription factor: HB | details |
| TreatCFM001281 | Transcription_related, Transcription factor: BBR-BPC pyrimidine nucleotide metabolic process dCMP deaminase activity polysaccharide biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc homogalacturonan biosynthesis Phenylpropanoid biosynthesis plant-type cell wall organization | details |
| TreatCFM001343 | formation of glycosidic bonds, GlycosylTransferases: GTnc aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xylogalacturonan biosynthesis intracellular organelle part | details |
| TreatCFM001654 | protein export from nucleus nuclear export signal receptor activity protein import into nucleus Ran GTPase binding nuclear envelope | details |
| TreatCFM001747 | Ubiquitin_Proteasome_system, E3: RING peptidyl-proline hydroxylation to 4-hydroxy-L-proline Arginine and proline metabolism nucleic acid binding procollagen-proline 4-dioxygenase activity RNA secondary structure unwinding L-ascorbic acid binding membrane endoplasmic reticulum membrane | details |
| TreatCFM001831 | chiasma assembly meiotic mismatch repair involved in reciprocal meiotic recombination germ cell nucleus synaptonemal complex mismatch repair complex formation of glycosidic bonds, GlycosylTransferases: GTnc protein glycosylation damaged DNA binding mismatched DNA binding galactosyltransferase activity | details |
| TreatCFM001843 | urate degradation to allantoin I hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: MIKC Transcription_related, Transcription factor: MYB-related RNA secondary structure unwinding rRNA processing Spliceosome Starch and sucrose metabolism | details |
| TreatCFM001981 | phosphate acquisition Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 maintenance of root meristem identity COPII vesicle coat Protein processing in endoplasmic reticulum L-ascorbate oxidase activity oxidoreductase activity, oxidizing metal ions acid phosphatase activity actin binding | details |
| TreatCFM002042 | response to gibberellin G1/S transition of mitotic cell cycle formation of glycosidic bonds, GlycosylTransferases: GTnc galactosyltransferase activity seed development protein glycosylation response to cytokinin carbohydrate binding Plant hormone signal transduction | details |
| TreatCFM002043 | adenosine ribonucleotides de novo biosynthesis mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) ATP synthesis coupled proton transport proton-transporting ATP synthase activity, rotational mechanism proton-transporting ATPase activity, rotational mechanism Mismatch repair SNARE interactions in vesicular transport | details |
Expression profiles
 Show details about module gene expression profiling |