TreatCFM001264's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.004048762 | GO:0016818 |
| nuclease activity | 0.012137316 | GO:0004518 |
| interstrand cross-link repair | 0.012871389 | GO:0036297 |
| box C/D snoRNP complex | 0.013147787 | GO:0031428 |
| U4/U6 x U5 tri-snRNP complex | 0.013147787 | GO:0046540 |
| Fanconi anemia pathway | 0.013806304 | KEGG pathway |
| precatalytic spliceosome | 0.014150788 | GO:0071011 |
| maturation of SSU-rRNA | 0.015005529 | GO:0030490 |
| maturation of LSU-rRNA | 0.015005529 | GO:0000470 |
| zinc ion binding | 0.020344995 | GO:0008270 |
| small-subunit processome | 0.029232331 | GO:0032040 |
| nucleic acid phosphodiester bond hydrolysis | 0.032045613 | GO:0090305 |
| RNA processing | 0.032045613 | GO:0006396 |
| mRNA splicing, via spliceosome | 0.032045613 | GO:0000398 |
| cytosolic large ribosomal subunit | 0.034204103 | GO:0022625 |
| Spliceosome | 0.04413962 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004352 | AT4G25515 (2.00E-116) | SLK3|SEUSS-like 3 |
| CRO_T006954 | AT4G14920 (7.00E-33) | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein |
| CRO_T009348 | AT3G52240 (3.00E-11) | unknown protein |
| CRO_T016326 | AT1G48360 (2.00E-66) | zinc ion binding; nucleic acid binding; hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides |
| CRO_T024067 | AT3G17740 (0) | unknown protein |
| CRO_T030279 | AT4G22380 (3.00E-55) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001273 | outer membrane-bounded periplasmic space intracellular protoheme IX ABC transporter activity heme-transporting ATPase activity coenzyme A transmembrane transporter activity hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc homogalacturonan degradation coenzyme A transmembrane transport heme transport cytochrome complex assembly tRNA modification hydrolase activity, acting on glycosyl bonds mitochondrial inner membrane | details |
| TreatCFM001349 | interstrand cross-link repair Fanconi anemia pathway hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides nuclease activity nucleic acid phosphodiester bond hydrolysis | details |
| TreatCFM001373 | negative regulation of apoptotic process Apelin signaling pathway Autophagy - yeast Protein_kinases_phosphatases, PPC:4.2.4: SNF1 Related Protein Kinase (SnRK) RNA processing | details |
| TreatCFM001413 | outer membrane-bounded periplasmic space intracellular protoheme IX ABC transporter activity heme-transporting ATPase activity Protein_kinases_phosphatases, PPC:5.1.1: Other Kinase cytochrome complex assembly tRNA modification heme transport Transcription_related, Transcription regulator: PHD | details |
| TreatCFM001645 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Protein_kinases_phosphatases, PPC:4.1.2: STE20-PAK Like Protein Kinase hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides mannosylglycoprotein endo-beta-mannosidase activity Fanconi anemia pathway interstrand cross-link repair receptor signaling protein serine/threonine kinase activity nuclease activity Transcription_related, Transcription factor: GRAS | details |
Expression profiles
 Show details about module gene expression profiling |