TreatCFM001854's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| glucan 1,3-alpha-glucosidase activity | 0.004514645 | GO:0033919 |
| thiol oxidase activity | 0.004514645 | GO:0016972 |
| adenosine ribonucleotides de novo biosynthesis | 0.005838109 | plantCyc |
| posttranscriptional regulation of gene expression | 0.010385645 | GO:0010608 |
| heat acclimation | 0.010385645 | GO:0010286 |
| mitochondrion | 0.016230153 | GO:0005739 |
| proton-transporting ATP synthase complex, catalytic core F(1) | 0.016230153 | GO:0045261 |
| N-Glycan biosynthesis | 0.027559619 | KEGG pathway |
| response to cold | 0.03112472 | GO:0009409 |
| hyperosmotic salinity response | 0.032544274 | GO:0042538 |
| response to water deprivation | 0.032544274 | GO:0009414 |
| ATP synthesis coupled proton transport | 0.032544274 | GO:0015986 |
| ATP hydrolysis coupled proton transport | 0.032544274 | GO:0015991 |
| proton-transporting ATPase activity, rotational mechanism | 0.037160604 | GO:0046961 |
| proton-transporting ATP synthase activity, rotational mechanism | 0.037160604 | GO:0046933 |
| identical protein binding | 0.038708506 | GO:0042802 |
| response to abscisic acid | 0.042644996 | GO:0009737 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004154 | AT5G63840 (5.00E-97) | PSL5|PRIORITY IN SWEET LIFE 5; RSW3|RADIAL SWELLING 3 |
| CRO_T004162 | AT4G21320 (9.00E-132) | HSA32|HEAT-STRESS-ASSOCIATED 32 |
| CRO_T007308 | AT1G49880 (7.00E-23) | EMB3106|EMBRYO DEFECTIVE 3106; Erv1|Erv1 |
| CRO_T014868 | ATMG01190 (4.00E-18) | ATP1|ATP synthase subunit 1 |
| CRO_T015646 | AT2G35630 (0) | MOR1|MICROTUBULE ORGANIZATION 1 |
| CRO_T020659 | AT5G50720 (9.00E-21) | ATHVA22E|HVA22 HOMOLOGUE E |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000591 | Carbon metabolism Protein_kinases_phosphatases, PPC:1.8.1: Leucine Rich Repeat Kinase I posttranscriptional regulation of gene expression heat acclimation glycolytic process ascorbate glutathione cycle L-ascorbate degradation V L-valine degradation I Rubisco shunt glycolysis IV (plant cytosol) glycolysis I (from glucose 6-phosphate) pyruvate kinase activity potassium ion binding | details |
| TreatCFM001393 | carbohydrate binding glucan 1,3-alpha-glucosidase activity aldose 1-epimerase activity L-amino acid transmembrane transporter activity solute:proton antiporter activity negative regulation of biological process L-alpha-amino acid transmembrane transport hexose metabolic process L-amino acid transport MicroRNAs in cancer early endosome membrane potassium ion transport Glycolysis / Gluconeogenesis N-Glycan biosynthesis SNARE binding SNAP receptor activity cellular macromolecule metabolic process antiporter activity primary metabolic process exocytosis vesicle fusion | details |
| TreatCFM001394 | benzoate biosynthesis III (CoA-dependent, non-β-oxidative) fatty acid α-oxidation I negative regulation of biological process L-alpha-amino acid transmembrane transport L-amino acid transport cellular aldehyde metabolic process mitochondrion organization integral component of mitochondrial outer membrane glucan 1,3-alpha-glucosidase activity aldehyde dehydrogenase [NAD(P)+] activity 3-chloroallyl aldehyde dehydrogenase activity MicroRNAs in cancer Mitophagy - animal L-amino acid transmembrane transporter activity Glycolysis / Gluconeogenesis cellular macromolecule metabolic process aldehyde dehydrogenase (NAD) activity N-Glycan biosynthesis primary metabolic process Ubiquitin_Proteasome_system, E3 adaptor: F-box small GTPase mediated signal transduction | details |
| TreatCFM001442 | Transcription_related, Transcription regulator: PHD hyperosmotic salinity response response to water deprivation response to cold response to abscisic acid | details |
| TreatCFM001629 | adenosine ribonucleotides de novo biosynthesis cell growth cellulose microfibril organization proton-transporting ATPase activity, rotational mechanism proton-transporting ATP synthase activity, rotational mechanism ATP hydrolysis coupled proton transport ATP synthesis coupled proton transport mitochondrion anchored component of membrane proton-transporting ATP synthase complex, catalytic core F(1) Oxidative phosphorylation | details |
| TreatCFM001715 | γ-glutamyl cycle nuclear export signal receptor activity glucan 1,3-alpha-glucosidase activity protein export from nucleus protein import into nucleus ribosomal large subunit assembly Ran GTPase binding N-Glycan biosynthesis | details |
| TreatCFM001781 | Ras signaling pathway cytoskeletal part microtubule cytoskeleton cytokinesis by cell plate formation | details |
| TreatCFM001874 | thioredoxin pathway adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Transcription_related, Transcription regulator: AUX/IAA Apelin signaling pathway response to sucrose cellular response to nitrogen levels response to cold Plant hormone signal transduction | details |
| TreatCFM002023 | N-Glycan biosynthesis carbohydrate binding thiol oxidase activity glucan 1,3-alpha-glucosidase activity alpha-1,4-glucosidase activity maltose alpha-glucosidase activity potassium ion binding pyruvate kinase activity glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) Rubisco shunt maltose metabolic process glycolytic process response to water deprivation hyperosmotic salinity response response to cold identical protein binding response to abscisic acid | details |
| TreatCFM002027 | γ-glutamyl cycle glucan 1,3-alpha-glucosidase activity alkane biosynthetic process cuticle hydrocarbon biosynthetic process N-Glycan biosynthesis cell periphery carbohydrate binding cytoplasmic part single-organism process | details |
| TreatCFM002136 | Ubiquitin_Proteasome_system, DUB: USP thiol oxidase activity Ras signaling pathway maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cellular protein metabolic process cytoplasmic translation cysteine-type peptidase activity poly(A) RNA binding metal ion binding identical protein binding small GTPase mediated signal transduction | details |
Expression profiles
 Show details about module gene expression profiling |