CFinderM000904's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
IWS1 Transcription_Regulator(from iTAK)0.029077046GFam
RLK-Pelle_WAK_LRK10L-1 (from iTAK)0.029077046GFam
Steroid_biosynthesis0.030052014KEGG
GPI anchor metabolic process,0.047593899GO:0006505

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000038G1400alpha/beta-Hydrolases superfamily proteinAT4G34310 (0.00E+00)
PH01000068G0150Transcription elongation factor (TFIIS) family proteinAT5G05140 (1.10E-44)
PH01000141G1130NAC domain containing protein 35AT2G02450 (2.30E-71)
PH01000666G0830ARM repeat superfamily proteinAT1G72560 (3.00E-174)
PH01000817G0030Protein kinase family proteinAT5G38210 (3.00E-115)
PH01001227G0490Low temperature and salt responsive protein familyAT4G28088 (4.40E-18)
PH01001239G0230Ergosterol biosynthesis ERG4/ERG24 familyAT3G52940 (8.00E-124)
PH01001463G0180GTP-binding protein, HflXAT3G49725 (7.00E-100)
PH01001580G0220actin-related protein C1AAT2G30910 (1.50E-36)
PH01001621G0250alpha/beta-Hydrolases superfamily proteinAT2G36290 (2.00E-85)
PH01001805G0010AT hook motif DNA-binding family proteinAT3G61310 (2.90E-29)
PH01001979G0300DPP6 N-terminal domain-like proteinAT1G21680 (2.30E-47)
PH01002438G0040-- (-)
PH01002460G0160-AT2G45980 (3.20E-29)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000340PEK_PEK (from iTAK)
Steroid_biosynthesis
Homologous_recombination
DNA metabolic process,
oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor,
details
CFinderM000781spliceosomal complex,
GPI anchor metabolic process,
mitosis,
Spliceosome
details
CFinderM000857RLK-Pelle_WAK_LRK10L-1 (from iTAK)
ATP biosynthetic process,
ATP_catabolic_process
nitrogen compound metabolic process,
Oxidative_phosphorylation
details
CFinderM000903protein neddylation,
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
Ubiquitin_mediated_proteolysis
cellular protein modification process,
NAC Transcription_Regulator(from PlantTFDB)
details
CFinderM000915UTP biosynthetic process,
nucleoside_diphosphate_phosphorylation
CTP biosynthetic process,
GTP biosynthetic process,
regulation of actin filament polymerization,
nucleoside diphosphate kinase activity,
cytoskeleton,
Pyrimidine_metabolism
Purine_metabolism
details
CFinderM001022IWS1 Transcription_Regulator(from iTAK)
protein neddylation,
cellular protein modification process,
Ubiquitin_mediated_proteolysis
transcription, DNA-dependent,
small protein activating enzyme activity,
details
CFinderM001323CMGC_GSK (from iTAK)
Glutathione_metabolism
Ascorbate_and_aldarate_metabolism
details
CFinderM001342details
CFinderM001385cytoskeleton,
regulation of actin filament polymerization,
carbon-sulfur lyase activity,
MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
RNA_transport
details
CFinderM001413protein neddylation,
IWS1 Transcription_Regulator(from iTAK)
RLK-Pelle_LRR-VI-2 (from iTAK)
C2C2-Dof Transcription_Regulator(from iTAK)
Dof Transcription_Regulator(from PlantTFDB)
Ubiquitin_mediated_proteolysis
cellular protein modification process,
small protein activating enzyme activity,
details
CFinderM001414PHD Transcription_Regulator(from iTAK)
details
CFinderM001435Jumonji Transcription_Regulator(from iTAK)
PHD Transcription_Regulator(from iTAK)
RNA_transport
details
CFinderM001473GPI anchor metabolic process,
DNA recombination,
RNA_degradation
details
CFinderM001480Steroid_biosynthesis
oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor,
membrane,
details
CFinderM001533RLK-Pelle_LRR-Xa (from iTAK)
cytochrome b6f complex,
Ubiquinone_and_other_terpenoid-quinone_biosynthesis
translation,
cation binding,
structural constituent of ribosome,
alpha-amylase activity,
large ribosomal subunit,
details
CFinderM001559GT22 GlycosylTransferases
intrinsic to endoplasmic reticulum membrane,
GPI anchor metabolic process,
GPI anchor biosynthetic process,
N-Glycan_biosynthesis
Various_types_of_N-glycan_biosynthesis
details
CFinderM001636GPI anchor metabolic process,
double-strand break repair,
protein folding,
nucleus,
DNA metabolic process,
exonuclease activity,
endonuclease activity,
phosphoprotein phosphatase activity,
manganese ion binding,
peptidyl-prolyl cis-trans isomerase activity,
details
CFinderM001765RLK-Pelle_WAK_LRK10L-1 (from iTAK)
Steroid_biosynthesis
oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor,
details
CFinderM001769double-strand break repair,
regulation of actin filament polymerization,
DNA metabolic process,
cytoskeleton,
endonuclease activity,
exonuclease activity,
details
CFinderM001772Plant_hormone_signal_transduction
outer membrane-bounded periplasmic space,
cytoskeleton,
regulation of actin filament polymerization,
bZIP Transcription_Regulator(from PlantTFDB)
nucleosome,
details
CFinderM001839GPI anchor metabolic process,
DNA methylation,
DNA recombination,
Base_excision_repair
Ubiquitin_mediated_proteolysis
details
CFinderM001855Base_excision_repair
GPI anchor metabolic process,
DNA recombination,
details
CFinderM001856GPI anchor metabolic process,
Base_excision_repair
nuclease activity,
details

4.Expression profilings


Show details about module gene expression profiling