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1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | IMP biosynthetic process, | 0.006247949 | GO:0006188 | | purine ribonucleoside monophosphate biosynthetic process, | 0.006247949 | GO:0009168 | | thiolester_hydrolase_activity | 0.008557015 | GO:0016790 | | AMP deaminase activity, | 0.008557015 | GO:0003876 | | deaminase activity, | 0.008557015 | GO:0019239 | | regulation of ARF GTPase activity, | 0.011961207 | GO:0032312 | | ARF GTPase activator activity, | 0.01229014 | GO:0008060 | | Fatty_acid_biosynthesis | 0.022436445 | KEGG | | Purine_metabolism | 0.040333895 | KEGG | | fatty acid biosynthetic process, | 0.042997757 | GO:0006633 | | zinc ion binding, | 0.049494749 | GO:0008270 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000502G0010 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT2G27610 (8.30E-50) | | PH01000877G0220 | DHHC-type zinc finger family protein | AT5G50020 (3.60E-48) | | PH01001196G0070 | autophagy 9 (APG9) | AT2G31260 (0.00E+00) | | PH01001349G0080 | Pentatricopeptide repeat (PPR) superfamily protein | AT1G03100 (0.00E+00) | | PH01002178G0190 | fatty acyl-ACP thioesterases B | AT1G08510 (7.00E-136) | | PH01004843G0060 | AMP deaminase, putative / myoadenylate deaminase, putative | AT2G38280 (0.00E+00) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000688 | GT64 GlycosylTransferases
Alanine,_aspartate_and_glutamate_metabolism
intrinsic to endoplasmic reticulum membrane,
Nicotinate_and_nicotinamide_metabolism
Terpenoid_backbone_biosynthesis
regulation of ARF GTPase activity,
isoprenoid biosynthetic process,
| details | | CFinderM001389 | outer membrane-bounded periplasmic space,
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
Protein_processing_in_endoplasmic_reticulum
| details | | CFinderM001432 | RLK-Pelle_CR4L (from iTAK)
ubiquitin ligase complex,
Ubiquitin_mediated_proteolysis
regulation of ARF GTPase activity,
| details | | CFinderM001436 | STE_STE20-Fray (from iTAK)
CAMTA Transcription_Regulator(from PlantTFDB)
Ubiquitin_mediated_proteolysis
| details | | CFinderM001457 | mRNA_surveillance_pathway
Diterpenoid_biosynthesis
CAMTA Transcription_Regulator(from PlantTFDB)
protein binding,
mechanically-gated_ion_channel_activity
| details | | CFinderM001458 | mRNA_surveillance_pathway
AGC_RSK-2 (from iTAK)
SBP Transcription_Regulator(from PlantTFDB)
cell death,
| details | | CFinderM001499 | Glutathione_metabolism
metallopeptidase activity,
ionotropic glutamate receptor activity,
extracellular-glutamate-gated ion channel activity,
outer membrane-bounded periplasmic space,
| details | | CFinderM001826 | regulation of ARF GTPase activity,
| details |
4.Expression profilings |
