|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | regulation of ARF GTPase activity, | 0.012918103 | GO:0032312 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000151G1330 | NB-ARC domain-containing disease resistance protein | AT3G46730 (1.90E-70) | | PH01000281G1000 | - | - (-) | | PH01000365G0570 | - | AT5G49960 (2.00E-153) | | PH01000428G0370 | DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain | AT5G60410 (0.00E+00) | | PH01000502G0010 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT2G27610 (8.30E-50) | | PH01001015G0260 | AAA-type ATPase family protein | AT1G02890 (0) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000688 | GT64 GlycosylTransferases
Alanine,_aspartate_and_glutamate_metabolism
intrinsic to endoplasmic reticulum membrane,
Nicotinate_and_nicotinamide_metabolism
Terpenoid_backbone_biosynthesis
regulation of ARF GTPase activity,
isoprenoid biosynthetic process,
| details | | CFinderM001010 | RLK-Pelle_PERK-2 (from iTAK)
ethylene mediated signaling pathway,
endoplasmic reticulum membrane,
Plant_hormone_signal_transduction
protein histidine kinase activity,
Others Transcription_Regulator(from iTAK)
two-component sensor activity,
protein tyrosine kinase activity,
two-component signal transduction system (phosphorelay),
EIL Transcription_Regulator(from PlantTFDB)
two-component response regulator activity,
signal transducer activity,
sulfate assimilation,
| details | | CFinderM001053 | endoplasmic reticulum membrane,
ethylene mediated signaling pathway,
Others Transcription_Regulator(from iTAK)
protein histidine kinase activity,
Plant_hormone_signal_transduction
two-component sensor activity,
signal transducer activity,
two-component response regulator activity,
| details | | CFinderM001304 | nucleoside-triphosphatase activity,
ATPase activity, coupled to transmembrane movement of substances,
GT47 GlycosylTransferases
RLK-Pelle_CR4L (from iTAK)
ABC_transporters
ATPase activity,
ATP binding,
nucleotide binding,
SNF2 Transcription_Regulator(from iTAK)
| details | | CFinderM001378 | IMP biosynthetic process,
purine ribonucleoside monophosphate biosynthetic process,
thiolester_hydrolase_activity
AMP deaminase activity,
deaminase activity,
regulation of ARF GTPase activity,
ARF GTPase activator activity,
Fatty_acid_biosynthesis
Purine_metabolism
fatty acid biosynthetic process,
zinc ion binding,
| details | | CFinderM001432 | RLK-Pelle_CR4L (from iTAK)
ubiquitin ligase complex,
Ubiquitin_mediated_proteolysis
regulation of ARF GTPase activity,
| details | | CFinderM001436 | STE_STE20-Fray (from iTAK)
CAMTA Transcription_Regulator(from PlantTFDB)
Ubiquitin_mediated_proteolysis
| details | | CFinderM001457 | mRNA_surveillance_pathway
Diterpenoid_biosynthesis
CAMTA Transcription_Regulator(from PlantTFDB)
protein binding,
mechanically-gated_ion_channel_activity
| details | | CFinderM001458 | mRNA_surveillance_pathway
AGC_RSK-2 (from iTAK)
SBP Transcription_Regulator(from PlantTFDB)
cell death,
| details |
4.Expression profilings |
